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author | Gard Spreemann <gspreemann@gmail.com> | 2018-06-15 12:34:03 +0200 |
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committer | Gard Spreemann <gspreemann@gmail.com> | 2018-06-15 12:34:03 +0200 |
commit | 41482b4260b4aff3d6803e340d5c94fbefb9af67 (patch) | |
tree | 89eae43dcb3fd4ab040e96f3d5479427d8cd2c7f /cython/example/rips_complex_diagram_persistence_from_off_file_example.py | |
parent | 41a1b8c2728e212c832c0384c8bb424139a247cf (diff) | |
parent | c524232f734de875d69e2f190f01a6c976024368 (diff) |
Merge branch 'upstream/latest' into dfsg/latest
Diffstat (limited to 'cython/example/rips_complex_diagram_persistence_from_off_file_example.py')
-rwxr-xr-x | cython/example/rips_complex_diagram_persistence_from_off_file_example.py | 11 |
1 files changed, 6 insertions, 5 deletions
diff --git a/cython/example/rips_complex_diagram_persistence_from_off_file_example.py b/cython/example/rips_complex_diagram_persistence_from_off_file_example.py index 5951eedf..d15d5eb0 100755 --- a/cython/example/rips_complex_diagram_persistence_from_off_file_example.py +++ b/cython/example/rips_complex_diagram_persistence_from_off_file_example.py @@ -9,7 +9,7 @@ import argparse Author(s): Vincent Rouvreau - Copyright (C) 2016 INRIA + Copyright (C) 2016 Inria This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by @@ -26,7 +26,7 @@ import argparse """ __author__ = "Vincent Rouvreau" -__copyright__ = "Copyright (C) 2016 INRIA" +__copyright__ = "Copyright (C) 2016 Inria" __license__ = "GPL v3" parser = argparse.ArgumentParser(description='RipsComplex creation from ' @@ -39,7 +39,7 @@ parser = argparse.ArgumentParser(description='RipsComplex creation from ' parser.add_argument("-f", "--file", type=str, required=True) parser.add_argument("-e", "--max_edge_length", type=float, default=0.5) parser.add_argument("-d", "--max_dimension", type=int, default=1) -parser.add_argument("-b", "--band_boot", type=float, default=0.) +parser.add_argument("-b", "--band", type=float, default=0.) parser.add_argument('--no-diagram', default=False, action='store_true' , help='Flag for not to display the diagrams') args = parser.parse_args() @@ -53,7 +53,8 @@ with open(args.file, 'r') as f: message = "RipsComplex with max_edge_length=" + repr(args.max_edge_length) print(message) - rips_complex = gudhi.RipsComplex(off_file=args.file, max_edge_length=args.max_edge_length) + point_cloud = gudhi.read_off(off_file=args.file) + rips_complex = gudhi.RipsComplex(points=point_cloud, max_edge_length=args.max_edge_length) simplex_tree = rips_complex.create_simplex_tree(max_dimension=args.max_dimension) message = "Number of simplices=" + repr(simplex_tree.num_simplices()) @@ -65,7 +66,7 @@ with open(args.file, 'r') as f: print(simplex_tree.betti_numbers()) if args.no_diagram == False: - pplot = gudhi.plot_persistence_diagram(diag, band_boot=args.band_boot) + pplot = gudhi.plot_persistence_diagram(diag, band=args.band) pplot.show() else: print(args.file, "is not a valid OFF file") |