diff options
author | vrouvrea <vrouvrea@636b058d-ea47-450e-bf9e-a15bfbe3eedb> | 2015-09-01 07:50:33 +0000 |
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committer | vrouvrea <vrouvrea@636b058d-ea47-450e-bf9e-a15bfbe3eedb> | 2015-09-01 07:50:33 +0000 |
commit | 4b44247f14ddd84bf3e58ba53fe93a3e793f0ce4 (patch) | |
tree | 133f35778085227857b0351efe340e97d5dbec51 /src/Alpha_complex | |
parent | cb82907d03e3f875a418efc52570970c01c2677d (diff) |
Documentation fix (starts at 0 and not 1 + alpha shape was not correct)
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@765 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: 99f8d4cd274778f5d7aac04afa84b780dc3678ec
Diffstat (limited to 'src/Alpha_complex')
-rw-r--r-- | src/Alpha_complex/doc/Intro_alpha_complex.h | 10 | ||||
-rw-r--r-- | src/Alpha_complex/doc/alpha_complex_doc.ipe | 64 | ||||
-rw-r--r-- | src/Alpha_complex/doc/alpha_complex_doc.png | bin | 46226 -> 64997 bytes | |||
-rw-r--r-- | src/Alpha_complex/doc/alpha_complex_doc_135.ipe | 78 | ||||
-rw-r--r-- | src/Alpha_complex/doc/alpha_complex_doc_135.png | bin | 94098 -> 120335 bytes | |||
-rw-r--r-- | src/Alpha_complex/doc/alpha_complex_doc_alpha_shape.ipe | 75 | ||||
-rw-r--r-- | src/Alpha_complex/doc/alpha_complex_doc_alpha_shape.png | bin | 70425 -> 136492 bytes |
7 files changed, 108 insertions, 119 deletions
diff --git a/src/Alpha_complex/doc/Intro_alpha_complex.h b/src/Alpha_complex/doc/Intro_alpha_complex.h index 34af2b98..d266219b 100644 --- a/src/Alpha_complex/doc/Intro_alpha_complex.h +++ b/src/Alpha_complex/doc/Intro_alpha_complex.h @@ -35,7 +35,7 @@ namespace alphacomplex { * * Alpha_complex is a Simplex_tree constructed from each finite cell of a Delaunay Triangulation. * - * The filtration value of each simplex is computed from the alpha value of the simplex if it is Gabriel or + * The filtration value of each simplex is computed from the alpha square value of the simplex if it is Gabriel or * from the alpha value of the simplex coface that makes the simplex not Gabriel. * * Please refer to \cite AlphaShapesDefinition for a more complete alpha complex definition. @@ -54,7 +54,7 @@ namespace alphacomplex { * * When launching: * - * \code $> ./alphaoffreader ../../data/points/alphacomplexdoc.off + * \code $> ./alphaoffreader ../../data/points/alphacomplexdoc.off 60.0 * \endcode * * the program output is: @@ -77,7 +77,7 @@ namespace alphacomplex { * \For{i : dimension $\rightarrow$ 1} * \ForAll{$\sigma$ of dimension i} * \If {filtration($\sigma$) is NaN} - * \State filtration($\sigma$) = $\alpha(\sigma)$ + * \State filtration($\sigma$) = $\alpha^2(\sigma)$ * \EndIf * \ForAll{$\tau$ face of $\sigma$} \Comment{propagate alpha filtration value} * \If {filtration($\tau$) is not NaN} @@ -105,8 +105,8 @@ namespace alphacomplex { * * \section alpha-shape Alpha shape * - * In the example above, the alpha shape of \f$\alpha_{74} < \alpha < \alpha_{73}\f$ is the alpha complex where the - * \f$\alpha_{74} <\f$ filtration value \f$< \alpha_{73}\f$ as described in \cite AlphaShapesIntroduction + * In the example above, the alpha shape of \f$\alpha^2_{74} < \alpha^2 < \alpha^2_{73}\f$ is the alpha complex where the + * \f$\alpha^2_{74} <\f$ filtration value \f$< \alpha^2_{73}\f$ as described in \cite AlphaShapesIntroduction * * \image html "alpha_complex_doc_alpha_shape.png" "Alpha shape example" * \copyright GNU General Public License v3. diff --git a/src/Alpha_complex/doc/alpha_complex_doc.ipe b/src/Alpha_complex/doc/alpha_complex_doc.ipe index 6257b2f4..b5601143 100644 --- a/src/Alpha_complex/doc/alpha_complex_doc.ipe +++ b/src/Alpha_complex/doc/alpha_complex_doc.ipe @@ -1,7 +1,7 @@ <?xml version="1.0"?> <!DOCTYPE ipe SYSTEM "ipe.dtd"> <ipe version="70005" creator="Ipe 7.1.4"> -<info created="D:20150603143945" modified="D:20150622134959"/> +<info created="D:20150603143945" modified="D:20150831170130"/> <ipestyle name="basic"> <symbol name="arrow/arc(spx)"> <path stroke="sym-stroke" fill="sym-stroke" pen="sym-pen"> @@ -260,13 +260,13 @@ h 320 580 l </path> <text matrix="1 0 0 1 -260 0" transformations="translations" pos="380 530" stroke="darkcyan" type="label" width="118.196" height="8.307" depth="2.32" valign="baseline" size="large">Delaunay triangulation</text> -<text matrix="1 0 0 1 -242.155 -3.50128" transformations="translations" pos="282.952 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--- a/src/Alpha_complex/doc/alpha_complex_doc.png +++ b/src/Alpha_complex/doc/alpha_complex_doc.png diff --git a/src/Alpha_complex/doc/alpha_complex_doc_135.ipe b/src/Alpha_complex/doc/alpha_complex_doc_135.ipe index df55639a..28b893b8 100644 --- a/src/Alpha_complex/doc/alpha_complex_doc_135.ipe +++ b/src/Alpha_complex/doc/alpha_complex_doc_135.ipe @@ -1,7 +1,7 @@ <?xml version="1.0"?> <!DOCTYPE ipe SYSTEM "ipe.dtd"> <ipe version="70005" creator="Ipe 7.1.4"> -<info created="D:20150603143945" modified="D:20150623140121"/> +<info created="D:20150603143945" modified="D:20150901093044"/> <ipestyle name="basic"> <symbol name="arrow/arc(spx)"> <path stroke="sym-stroke" fill="sym-stroke" pen="sym-pen"> @@ -259,14 +259,14 @@ h 350 520 l 320 580 l </path> -<text matrix="1 0 0 1 0 80" transformations="translations" pos="380 530" stroke="darkcyan" type="label" width="54.628" height="8.965" depth="2.99" valign="baseline" size="large">Cell [5,3,1]</text> -<text matrix="1 0 0 1 -2.15463 76.4987" 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matrix="1 0 0 1 -264 -162" transformations="translations" pos="375.332 578.49" stroke="black" type="label" width="4.981" height="6.42" depth="0" valign="baseline">3</text> +<text matrix="1 0 0 1 -264 -172" transformations="translations" pos="272.179 660.635" stroke="black" type="label" width="4.981" height="6.42" depth="0" valign="baseline">4</text> +<text matrix="1 0 0 1 -263.3 -172.154" transformations="translations" pos="296.419 724.197" stroke="black" type="label" width="4.981" height="6.42" depth="0" valign="baseline">5</text> +<text matrix="1 0 0 1 -264 -162" transformations="translations" pos="375.332 689.453" stroke="black" type="label" width="4.981" height="6.42" depth="0" valign="baseline">6</text> <path matrix="1 0 0 1 -264 -162" stroke="lightgray"> 280 660 m 300 710 l @@ -349,7 +349,7 @@ modified (NaN) 320 580 l 280 660 l </path> -<text matrix="1 0 0 1 -166.834 -240.52" transformations="translations" pos="212.724 627.389" stroke="darkcyan" type="label" width="14.814" height="4.294" depth="1.49" valign="baseline">$\alpha_{31}$</text> +<text matrix="1 0 0 1 -166.834 -240.52" transformations="translations" pos="212.724 627.389" stroke="darkcyan" type="label" width="14.814" height="4.294" depth="1.49" valign="baseline">$\alpha_{20}$</text> <path matrix="1 0 0 1 -264 -162" stroke="darkcyan" pen="heavier"> 290 530 m 320 580 l @@ -389,14 +389,14 @@ modified (NaN) 350 520 l 320 580 l </path> -<text matrix="1 0 0 1 -199.21 -189.117" transformations="translations" pos="380 530" stroke="darkred" type="label" width="168.308" height="8.965" depth="2.99" valign="baseline" size="large">[1,5] is not Gabriel $\rightarrow$ $\alpha_{15} = \alpha_{135}$</text> -<text matrix="1 0 0 1 -40.1546 -167.501" transformations="translations" pos="282.952 524.893" stroke="black" type="label" width="4.981" height="6.42" depth="0" valign="baseline">1</text> -<text matrix="1 0 0 1 -38 -164" transformations="translations" pos="352.708 510.349" stroke="black" type="label" width="4.981" height="6.42" depth="0" valign="baseline">2</text> -<text matrix="1 0 0 1 -38 -164" transformations="translations" pos="310.693 578.759" stroke="darkred" type="label" width="4.981" height="6.42" depth="0" valign="baseline">3</text> -<text matrix="1 0 0 1 -38 -164" transformations="translations" pos="375.332 578.49" stroke="black" type="label" width="4.981" height="6.42" depth="0" valign="baseline">4</text> -<text matrix="1 0 0 1 -38 -164" transformations="translations" pos="272.179 660.635" stroke="black" type="label" width="4.981" height="6.42" depth="0" valign="baseline">5</text> -<text matrix="1 0 0 1 -37.2997 -174.154" transformations="translations" pos="296.419 724.197" stroke="black" type="label" width="4.981" height="6.42" depth="0" valign="baseline">6</text> -<text matrix="1 0 0 1 -38 -164" transformations="translations" pos="375.332 689.453" stroke="black" type="label" width="4.981" height="6.42" depth="0" valign="baseline">7</text> +<text matrix="1 0 0 1 -199.21 -189.117" transformations="translations" pos="380 530" stroke="darkred" type="label" width="168.308" height="8.965" depth="2.99" valign="baseline" size="large">[0,4] is not Gabriel $\rightarrow$ $\alpha_{40} = \alpha_{420}$</text> +<text matrix="1 0 0 1 -40.1546 -167.501" transformations="translations" pos="282.952 524.893" stroke="black" type="label" width="4.981" height="6.42" depth="0" valign="baseline">0</text> +<text matrix="1 0 0 1 -38 -164" transformations="translations" pos="352.708 510.349" stroke="black" type="label" width="4.981" height="6.42" depth="0" valign="baseline">1</text> +<text matrix="1 0 0 1 -38 -164" transformations="translations" pos="310.693 578.759" stroke="darkred" type="label" width="4.981" height="6.42" depth="0" valign="baseline">2</text> +<text matrix="1 0 0 1 -38 -164" transformations="translations" pos="375.332 578.49" stroke="black" type="label" width="4.981" height="6.42" depth="0" valign="baseline">3</text> +<text matrix="1 0 0 1 -38 -164" transformations="translations" pos="272.179 660.635" stroke="black" type="label" width="4.981" height="6.42" depth="0" valign="baseline">4</text> +<text matrix="1 0 0 1 -37.2997 -174.154" transformations="translations" pos="296.419 724.197" stroke="black" type="label" width="4.981" height="6.42" depth="0" valign="baseline">5</text> +<text matrix="1 0 0 1 -38 -164" transformations="translations" pos="375.332 689.453" stroke="black" type="label" width="4.981" height="6.42" depth="0" valign="baseline">6</text> <path matrix="1 0 0 1 -38 -164" stroke="lightgray"> 280 660 m 300 710 l @@ -415,7 +415,7 @@ modified (NaN) 320 580 l 280 660 l </path> -<text matrix="1 0 0 1 52.4654 -193.97" transformations="translations" pos="212.724 627.389" stroke="darkcyan" type="label" width="14.814" height="4.294" depth="1.49" valign="baseline">$\alpha_{15}$</text> +<text matrix="1 0 0 1 52.4654 -193.97" transformations="translations" pos="212.724 627.389" stroke="darkcyan" type="label" width="14.814" height="4.294" depth="1.49" valign="baseline">$\alpha_{40}$</text> <path matrix="1 0 0 1 -38 -164" stroke="darkcyan" pen="heavier"> 290 530 m 280 660 l @@ -450,12 +450,12 @@ modified (NaN) 350 520 l 320 580 l </path> -<text matrix="1 0 0 1 123.845 -165.501" transformations="translations" pos="282.952 524.893" stroke="black" type="label" width="4.981" height="6.42" depth="0" valign="baseline">1</text> -<text matrix="1 0 0 1 126 -162" transformations="translations" pos="352.708 510.349" stroke="black" type="label" width="4.981" height="6.42" depth="0" valign="baseline">2</text> -<text matrix="1 0 0 1 126 -162" transformations="translations" pos="310.693 578.759" stroke="black" type="label" width="4.981" height="6.42" depth="0" valign="baseline">3</text> -<text matrix="1 0 0 1 126 -162" transformations="translations" pos="375.332 578.49" stroke="black" type="label" width="4.981" height="6.42" depth="0" valign="baseline">4</text> -<text matrix="1 0 0 1 126.7 -172.154" transformations="translations" pos="296.419 724.197" stroke="black" type="label" width="4.981" height="6.42" depth="0" valign="baseline">6</text> -<text matrix="1 0 0 1 126 -162" transformations="translations" pos="375.332 689.453" stroke="black" type="label" width="4.981" height="6.42" depth="0" valign="baseline">7</text> +<text matrix="1 0 0 1 123.845 -165.501" transformations="translations" pos="282.952 524.893" stroke="black" type="label" width="4.981" height="6.42" depth="0" valign="baseline">0</text> +<text matrix="1 0 0 1 126 -162" transformations="translations" pos="352.708 510.349" stroke="black" type="label" width="4.981" height="6.42" depth="0" valign="baseline">1</text> +<text matrix="1 0 0 1 126 -162" transformations="translations" pos="310.693 578.759" stroke="black" type="label" width="4.981" height="6.42" depth="0" valign="baseline">2</text> +<text matrix="1 0 0 1 126 -162" transformations="translations" pos="375.332 578.49" stroke="black" type="label" width="4.981" height="6.42" depth="0" valign="baseline">3</text> +<text matrix="1 0 0 1 126.7 -172.154" transformations="translations" pos="296.419 724.197" stroke="black" type="label" width="4.981" height="6.42" depth="0" valign="baseline">5</text> +<text matrix="1 0 0 1 126 -162" transformations="translations" pos="375.332 689.453" stroke="black" type="label" width="4.981" height="6.42" depth="0" valign="baseline">6</text> <path matrix="1 0 0 1 126 -162" stroke="lightgray"> 280 660 m 300 710 l @@ -474,8 +474,8 @@ modified (NaN) 320 580 l 280 660 l </path> -<text matrix="1 0 0 1 225.859 -165.729" transformations="translations" pos="212.724 627.389" stroke="darkcyan" type="label" width="14.814" height="4.294" depth="1.49" valign="baseline">$\alpha_{35}$</text> -<text matrix="1 0 0 1 122 -164" transformations="translations" pos="272.179 660.635" stroke="black" type="label" width="4.981" height="6.42" depth="0" valign="baseline">5</text> +<text matrix="1 0 0 1 225.859 -165.729" transformations="translations" pos="212.724 627.389" stroke="darkcyan" type="label" width="14.814" height="4.294" depth="1.49" valign="baseline">$\alpha_{42}$</text> +<text matrix="1 0 0 1 122 -164" transformations="translations" pos="272.179 660.635" stroke="black" type="label" width="4.981" height="6.42" depth="0" valign="baseline">4</text> <path stroke="darkcyan" pen="heavier"> 406.093 497.775 m 446.094 418.092 l @@ -488,7 +488,7 @@ modified (NaN) 425.854 457.774 m 470.795 457.774 l </path> -<text matrix="1 0 0 1 -48.9756 -209.799" transformations="translations" pos="380 530" stroke="darkcyan" type="label" width="231.798" height="8.965" depth="2.99" valign="baseline" size="large">[3,5] is Gabriel $\rightarrow$ $\alpha_{35}$ is not modified (NaN) +<text matrix="1 0 0 1 -48.9756 -209.799" transformations="translations" pos="380 530" stroke="darkcyan" type="label" width="231.798" height="8.965" depth="2.99" valign="baseline" size="large">[2,4] is Gabriel $\rightarrow$ $\alpha_{42}$ is not modified (NaN) </text> <path stroke="darkblue" arrow="normal/normal"> 205.028 596.091 m @@ -502,9 +502,9 @@ modified (NaN) 341.123 594.316 m 413.904 554.079 l </path> -<text matrix="1 0 0 1 39.645 -2.36686" transformations="translations" pos="199.703 569.464" stroke="darkblue" type="label" width="93.206" height="7.473" depth="2.49" valign="baseline">For all faces of [5,3,1]</text> +<text matrix="1 0 0 1 39.645 -2.36686" transformations="translations" pos="199.703 569.464" stroke="darkblue" type="label" width="93.206" height="7.473" depth="2.49" valign="baseline">For all faces of [4,2,0]</text> <text matrix="1 0 0 1 -93.391 2.68003" transformations="translations" pos="104.437 300.174" stroke="black" type="label" width="208.621" height="6.926" depth="1.93" valign="baseline">N.B. : is Gabriel on a single point has no sense.</text> -<text matrix="1 0 0 1 -36.9231 10" transformations="translations" pos="48 784" stroke="black" type="label" width="118.324" height="7.473" depth="2.49" valign="baseline">Dimension =2 - $\sigma$ = [5,3,1]</text> +<text matrix="1 0 0 1 -36.9231 10" transformations="translations" pos="48 784" stroke="black" type="label" width="118.324" height="7.473" depth="2.49" valign="baseline">Dimension =2 - $\sigma$ = [4,2,0]</text> <use name="mark/fdisk(sfx)" pos="247 431" size="normal" stroke="darkcyan" fill="white"/> <path stroke="darkcyan"> 247.333 430.892 m diff --git a/src/Alpha_complex/doc/alpha_complex_doc_135.png b/src/Alpha_complex/doc/alpha_complex_doc_135.png Binary files differindex edf61368..8ce6a426 100644 --- a/src/Alpha_complex/doc/alpha_complex_doc_135.png +++ b/src/Alpha_complex/doc/alpha_complex_doc_135.png diff --git a/src/Alpha_complex/doc/alpha_complex_doc_alpha_shape.ipe b/src/Alpha_complex/doc/alpha_complex_doc_alpha_shape.ipe index 192ea772..7563cf3d 100644 --- a/src/Alpha_complex/doc/alpha_complex_doc_alpha_shape.ipe +++ b/src/Alpha_complex/doc/alpha_complex_doc_alpha_shape.ipe @@ -1,7 +1,7 @@ <?xml version="1.0"?> 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