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authortlacombe <lacombe1993@gmail.com>2021-04-12 10:37:27 +0200
committertlacombe <lacombe1993@gmail.com>2021-04-12 10:37:27 +0200
commit69341c88c7c7819656c9a9b935fecc3bea50e4af (patch)
tree7fa0646180c04fb32854ca0aaf29d192d5e4118f /src/Witness_complex/utilities
parente94892f972357283e70c7534f84662dfaa21cc3e (diff)
parent7e05e915adc1be285e04eb00d3ab7ba1b797f38d (diff)
merge upstream/master into essential parts
Diffstat (limited to 'src/Witness_complex/utilities')
-rw-r--r--src/Witness_complex/utilities/CMakeLists.txt36
-rw-r--r--src/Witness_complex/utilities/strong_witness_persistence.cpp3
-rw-r--r--src/Witness_complex/utilities/weak_witness_persistence.cpp3
3 files changed, 22 insertions, 20 deletions
diff --git a/src/Witness_complex/utilities/CMakeLists.txt b/src/Witness_complex/utilities/CMakeLists.txt
index d986d2d1..60fea0b4 100644
--- a/src/Witness_complex/utilities/CMakeLists.txt
+++ b/src/Witness_complex/utilities/CMakeLists.txt
@@ -2,26 +2,26 @@ project(Witness_complex_utilities)
# CGAL and Eigen3 are required for Euclidean version of Witness
if(NOT CGAL_WITH_EIGEN3_VERSION VERSION_LESS 4.11.0)
-
- add_executable ( Witness_complex_strong_witness_persistence strong_witness_persistence.cpp )
- target_link_libraries(Witness_complex_strong_witness_persistence Boost::program_options)
+ if(TARGET Boost::program_options)
+ add_executable ( Witness_complex_strong_witness_persistence strong_witness_persistence.cpp )
+ target_link_libraries(Witness_complex_strong_witness_persistence Boost::program_options)
- add_executable ( Witness_complex_weak_witness_persistence weak_witness_persistence.cpp )
- target_link_libraries(Witness_complex_weak_witness_persistence Boost::program_options)
+ add_executable ( Witness_complex_weak_witness_persistence weak_witness_persistence.cpp )
+ target_link_libraries(Witness_complex_weak_witness_persistence Boost::program_options)
- if (TBB_FOUND)
- target_link_libraries(Witness_complex_strong_witness_persistence ${TBB_LIBRARIES})
- target_link_libraries(Witness_complex_weak_witness_persistence ${TBB_LIBRARIES})
- endif()
-
- add_test(NAME Witness_complex_strong_test_torus_persistence
- COMMAND $<TARGET_FILE:Witness_complex_strong_witness_persistence>
- "${CMAKE_SOURCE_DIR}/data/points/tore3D_1307.off" "-l" "20" "-a" "0.5")
- add_test(NAME Witness_complex_weak_test_torus_persistence
- COMMAND $<TARGET_FILE:Witness_complex_weak_witness_persistence>
- "${CMAKE_SOURCE_DIR}/data/points/tore3D_1307.off" "-l" "20" "-a" "0.5")
+ if (TBB_FOUND)
+ target_link_libraries(Witness_complex_strong_witness_persistence ${TBB_LIBRARIES})
+ target_link_libraries(Witness_complex_weak_witness_persistence ${TBB_LIBRARIES})
+ endif()
- install(TARGETS Witness_complex_strong_witness_persistence DESTINATION bin)
- install(TARGETS Witness_complex_weak_witness_persistence DESTINATION bin)
+ add_test(NAME Witness_complex_strong_test_torus_persistence
+ COMMAND $<TARGET_FILE:Witness_complex_strong_witness_persistence>
+ "${CMAKE_SOURCE_DIR}/data/points/tore3D_1307.off" "-l" "20" "-a" "0.5")
+ add_test(NAME Witness_complex_weak_test_torus_persistence
+ COMMAND $<TARGET_FILE:Witness_complex_weak_witness_persistence>
+ "${CMAKE_SOURCE_DIR}/data/points/tore3D_1307.off" "-l" "20" "-a" "0.5")
+ install(TARGETS Witness_complex_strong_witness_persistence DESTINATION bin)
+ install(TARGETS Witness_complex_weak_witness_persistence DESTINATION bin)
+ endif()
endif(NOT CGAL_WITH_EIGEN3_VERSION VERSION_LESS 4.11.0)
diff --git a/src/Witness_complex/utilities/strong_witness_persistence.cpp b/src/Witness_complex/utilities/strong_witness_persistence.cpp
index 1f61c77c..614de0d4 100644
--- a/src/Witness_complex/utilities/strong_witness_persistence.cpp
+++ b/src/Witness_complex/utilities/strong_witness_persistence.cpp
@@ -61,7 +61,8 @@ int main(int argc, char* argv[]) {
// Choose landmarks (decomment one of the following two lines)
// Gudhi::subsampling::pick_n_random_points(point_vector, nbL, std::back_inserter(landmarks));
- Gudhi::subsampling::choose_n_farthest_points(K(), witnesses, nbL, Gudhi::subsampling::random_starting_point,
+ Gudhi::subsampling::choose_n_farthest_points(K().squared_distance_d_object(), witnesses, nbL,
+ Gudhi::subsampling::random_starting_point,
std::back_inserter(landmarks));
// Compute witness complex
diff --git a/src/Witness_complex/utilities/weak_witness_persistence.cpp b/src/Witness_complex/utilities/weak_witness_persistence.cpp
index 93050af5..5ea31d6b 100644
--- a/src/Witness_complex/utilities/weak_witness_persistence.cpp
+++ b/src/Witness_complex/utilities/weak_witness_persistence.cpp
@@ -61,7 +61,8 @@ int main(int argc, char* argv[]) {
// Choose landmarks (decomment one of the following two lines)
// Gudhi::subsampling::pick_n_random_points(point_vector, nbL, std::back_inserter(landmarks));
- Gudhi::subsampling::choose_n_farthest_points(K(), witnesses, nbL, Gudhi::subsampling::random_starting_point,
+ Gudhi::subsampling::choose_n_farthest_points(K().squared_distance_d_object(), witnesses, nbL,
+ Gudhi::subsampling::random_starting_point,
std::back_inserter(landmarks));
// Compute witness complex