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| author | vrouvrea <vrouvrea@636b058d-ea47-450e-bf9e-a15bfbe3eedb> | 2018-07-02 20:10:04 +0000 |
|---|---|---|
| committer | vrouvrea <vrouvrea@636b058d-ea47-450e-bf9e-a15bfbe3eedb> | 2018-07-02 20:10:04 +0000 |
| commit | 8f6fffafb8afb8e08ba7bb06b19b0a0de557f5fb (patch) | |
| tree | 1f1e4e2d04619f474d25a4195b7149bb60ccbf6e /src/cython/CMakeLists.txt | |
| parent | 34d50c272e468e3cf39d18c7e43730274d936acd (diff) | |
| parent | 106372ae36905c2892c3dde6b7c36557baf54b34 (diff) | |
Merge python_nerve_gic branch
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3661 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: e69e38e22a478a7f2d6cbb7656c66743baf53a4b
Diffstat (limited to 'src/cython/CMakeLists.txt')
| -rw-r--r-- | src/cython/CMakeLists.txt | 32 |
1 files changed, 32 insertions, 0 deletions
diff --git a/src/cython/CMakeLists.txt b/src/cython/CMakeLists.txt index 17d440ee..8f1dec76 100644 --- a/src/cython/CMakeLists.txt +++ b/src/cython/CMakeLists.txt @@ -55,6 +55,7 @@ if(CYTHON_FOUND) if (NOT CGAL_VERSION VERSION_LESS 4.8.1) set(GUDHI_CYTHON_BOTTLENECK_DISTANCE "include '${CMAKE_CURRENT_SOURCE_DIR}/cython/bottleneck_distance.pyx'") + set(GUDHI_CYTHON_NERVE_GIC "include '${CMAKE_CURRENT_SOURCE_DIR}/cython/nerve_gic.pyx'") endif (NOT CGAL_VERSION VERSION_LESS 4.8.1) if (NOT CGAL_WITH_EIGEN3_VERSION VERSION_LESS 4.8.1) set(GUDHI_CYTHON_SUBSAMPLING "include '${CMAKE_CURRENT_SOURCE_DIR}/cython/subsampling.pyx'") @@ -185,6 +186,37 @@ if(CYTHON_FOUND) ${PYTHON_EXECUTABLE} "${CMAKE_CURRENT_SOURCE_DIR}/example/bottleneck_basic_example.py") add_gudhi_py_test(test_bottleneck_distance) + + # Cover complex + file(COPY ${CMAKE_SOURCE_DIR}/data/points/human.off DESTINATION ${CMAKE_CURRENT_BINARY_DIR}/) + file(COPY ${CMAKE_SOURCE_DIR}/data/points/COIL_database/lucky_cat.off DESTINATION ${CMAKE_CURRENT_BINARY_DIR}/) + file(COPY ${CMAKE_SOURCE_DIR}/data/points/COIL_database/lucky_cat_PCA1 DESTINATION ${CMAKE_CURRENT_BINARY_DIR}/) + add_test(NAME cover_complex_nerve_example_py_test + WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR} + COMMAND ${CMAKE_COMMAND} -E env "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}" + ${PYTHON_EXECUTABLE} "${CMAKE_CURRENT_SOURCE_DIR}/example/nerve_of_a_covering.py" + -f human.off -c 2 -r 10 -g 0.3) + + add_test(NAME cover_complex_coordinate_gic_example_py_test + WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR} + COMMAND ${CMAKE_COMMAND} -E env "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}" + ${PYTHON_EXECUTABLE} "${CMAKE_CURRENT_SOURCE_DIR}/example/coordinate_graph_induced_complex.py" + -f human.off -c 0 -v) + + add_test(NAME cover_complex_functional_gic_example_py_test + WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR} + COMMAND ${CMAKE_COMMAND} -E env "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}" + ${PYTHON_EXECUTABLE} "${CMAKE_CURRENT_SOURCE_DIR}/example/functional_graph_induced_complex.py" + -o lucky_cat.off + -f lucky_cat_PCA1 -v) + + add_test(NAME cover_complex_voronoi_gic_example_py_test + WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR} + COMMAND ${CMAKE_COMMAND} -E env "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}" + ${PYTHON_EXECUTABLE} "${CMAKE_CURRENT_SOURCE_DIR}/example/voronoi_graph_induced_complex.py" + -f human.off -n 700 -v) + + add_gudhi_py_test(test_cover_complex) endif (NOT CGAL_VERSION VERSION_LESS 4.8.1) if (NOT CGAL_WITH_EIGEN3_VERSION VERSION_LESS 4.7.0) |