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author | vrouvrea <vrouvrea@636b058d-ea47-450e-bf9e-a15bfbe3eedb> | 2017-09-28 13:43:58 +0000 |
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committer | vrouvrea <vrouvrea@636b058d-ea47-450e-bf9e-a15bfbe3eedb> | 2017-09-28 13:43:58 +0000 |
commit | ef61b085afd77976a2c7fc5dfa13bc4b293b4f95 (patch) | |
tree | 99c82e4ec0681c6d13ea68bfcecb76516c2a54b1 /src/cython/include/Rips_complex_interface.h | |
parent | 82fdc7d643e6ad589e16bc25782e8dd068d033ae (diff) |
Remove python rips_complex construction from files as it can lead to errors with correlation matrix
Add examples for doxygen
Cythonization of rips correlation matrix
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/rips_complex_from_correlation_matrix@2727 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: 8aae33839fa27f9d26897e625904671b2c05e0e7
Diffstat (limited to 'src/cython/include/Rips_complex_interface.h')
-rw-r--r-- | src/cython/include/Rips_complex_interface.h | 17 |
1 files changed, 0 insertions, 17 deletions
diff --git a/src/cython/include/Rips_complex_interface.h b/src/cython/include/Rips_complex_interface.h index 02985727..f26befbc 100644 --- a/src/cython/include/Rips_complex_interface.h +++ b/src/cython/include/Rips_complex_interface.h @@ -25,9 +25,7 @@ #include <gudhi/Simplex_tree.h> #include <gudhi/Rips_complex.h> -#include <gudhi/Points_off_io.h> #include <gudhi/distance_functions.h> -#include <gudhi/reader_utils.h> #include "Simplex_tree_interface.h" @@ -56,21 +54,6 @@ class Rips_complex_interface { } } - Rips_complex_interface(const std::string& file_name, double threshold, bool euclidean, bool from_file = true) { - if (euclidean) { - // Rips construction where file_name is an OFF file - Gudhi::Points_off_reader<Point_d> off_reader(file_name); - rips_complex_ = new Rips_complex<Simplex_tree_interface<>::Filtration_value>(off_reader.get_point_cloud(), - threshold, - Gudhi::Euclidean_distance()); - } else { - // Rips construction where values is a distance matrix - Distance_matrix distances = - Gudhi::read_lower_triangular_matrix_from_csv_file<Simplex_tree_interface<>::Filtration_value>(file_name); - rips_complex_ = new Rips_complex<Simplex_tree_interface<>::Filtration_value>(distances, threshold); - } - } - ~Rips_complex_interface() { delete rips_complex_; } |