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| author | Marc Glisse <marc.glisse@inria.fr> | 2020-06-19 17:17:59 +0200 |
|---|---|---|
| committer | GitHub <noreply@github.com> | 2020-06-19 17:17:59 +0200 |
| commit | cec4a5d7df6d5ed43511e94f9db580489979105a (patch) | |
| tree | 2e1fc9b4b24d163d7255189d3a77f7999e525f8c /src/python/CMakeLists.txt | |
| parent | c43010ec0244748c2f86a2b6622713f68fbd6cb8 (diff) | |
| parent | 8723a3a88b35ee4b08115b07fb0f5fe813567a87 (diff) | |
Merge pull request #328 from mglisse/tomato2
Tomato clustering
Diffstat (limited to 'src/python/CMakeLists.txt')
| -rw-r--r-- | src/python/CMakeLists.txt | 8 |
1 files changed, 8 insertions, 0 deletions
diff --git a/src/python/CMakeLists.txt b/src/python/CMakeLists.txt index 81be1b76..04f64ce3 100644 --- a/src/python/CMakeLists.txt +++ b/src/python/CMakeLists.txt @@ -36,6 +36,7 @@ if(PYTHONINTERP_FOUND) add_gudhi_debug_info("Pybind11 version ${PYBIND11_VERSION}") set(GUDHI_PYTHON_MODULES "${GUDHI_PYTHON_MODULES}'bottleneck', ") set(GUDHI_PYTHON_MODULES_EXTRA "${GUDHI_PYTHON_MODULES_EXTRA}'hera', ") + set(GUDHI_PYTHON_MODULES_EXTRA "${GUDHI_PYTHON_MODULES_EXTRA}'clustering', ") endif() if(CYTHON_FOUND) set(GUDHI_PYTHON_MODULES "${GUDHI_PYTHON_MODULES}'off_reader', ") @@ -130,6 +131,7 @@ if(PYTHONINTERP_FOUND) set(GUDHI_CYTHON_MODULES "${GUDHI_CYTHON_MODULES}'reader_utils', ") set(GUDHI_CYTHON_MODULES "${GUDHI_CYTHON_MODULES}'witness_complex', ") set(GUDHI_CYTHON_MODULES "${GUDHI_CYTHON_MODULES}'strong_witness_complex', ") + set(GUDHI_PYBIND11_MODULES "${GUDHI_PYBIND11_MODULES}'clustering/_tomato', ") set(GUDHI_PYBIND11_MODULES "${GUDHI_PYBIND11_MODULES}'hera/wasserstein', ") set(GUDHI_PYBIND11_MODULES "${GUDHI_PYBIND11_MODULES}'hera/bottleneck', ") if (NOT CGAL_VERSION VERSION_LESS 4.11.0) @@ -235,6 +237,7 @@ if(PYTHONINTERP_FOUND) file(COPY "gudhi/representations" DESTINATION "${CMAKE_CURRENT_BINARY_DIR}/gudhi/") file(COPY "gudhi/wasserstein" DESTINATION "${CMAKE_CURRENT_BINARY_DIR}/gudhi") file(COPY "gudhi/point_cloud" DESTINATION "${CMAKE_CURRENT_BINARY_DIR}/gudhi") + file(COPY "gudhi/clustering" DESTINATION "${CMAKE_CURRENT_BINARY_DIR}/gudhi" FILES_MATCHING PATTERN "*.py") file(COPY "gudhi/weighted_rips_complex.py" DESTINATION "${CMAKE_CURRENT_BINARY_DIR}/gudhi") file(COPY "gudhi/dtm_rips_complex.py" DESTINATION "${CMAKE_CURRENT_BINARY_DIR}/gudhi") file(COPY "gudhi/hera/__init__.py" DESTINATION "${CMAKE_CURRENT_BINARY_DIR}/gudhi/hera") @@ -499,6 +502,11 @@ if(PYTHONINTERP_FOUND) add_gudhi_py_test(test_dtm) endif() + # Tomato + if(SCIPY_FOUND AND SKLEARN_FOUND AND PYBIND11_FOUND) + add_gudhi_py_test(test_tomato) + endif() + # Weighted Rips if(SCIPY_FOUND) add_gudhi_py_test(test_weighted_rips_complex) |