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| author | Marc Glisse <marc.glisse@inria.fr> | 2020-04-29 23:00:17 +0200 |
|---|---|---|
| committer | Marc Glisse <marc.glisse@inria.fr> | 2020-04-29 23:00:17 +0200 |
| commit | 73a74011e4b5af0794f0463295beca924d32e0ee (patch) | |
| tree | fb825dc77e9984594109f9ea48838d0544dfca1e /src/python/gudhi/simplex_tree.pxd | |
| parent | 74155081bb8b3330c562d5c40d7f0a32fc188012 (diff) | |
| parent | 0bba67db83f33ff608366057d9c4f005fa6a514b (diff) | |
Merge remote-tracking branch 'origin/master' into dtmdensity
Diffstat (limited to 'src/python/gudhi/simplex_tree.pxd')
| -rw-r--r-- | src/python/gudhi/simplex_tree.pxd | 12 |
1 files changed, 8 insertions, 4 deletions
diff --git a/src/python/gudhi/simplex_tree.pxd b/src/python/gudhi/simplex_tree.pxd index 82f155de..1d4ed926 100644 --- a/src/python/gudhi/simplex_tree.pxd +++ b/src/python/gudhi/simplex_tree.pxd @@ -48,8 +48,7 @@ cdef extern from "Simplex_tree_interface.h" namespace "Gudhi": int dimension() int upper_bound_dimension() bool find_simplex(vector[int] simplex) - bool insert_simplex_and_subfaces(vector[int] simplex, - double filtration) + bool insert(vector[int] simplex, double filtration) vector[pair[vector[int], double]] get_star(vector[int] simplex) vector[pair[vector[int], double]] get_cofaces(vector[int] simplex, int dimension) @@ -57,6 +56,8 @@ cdef extern from "Simplex_tree_interface.h" namespace "Gudhi": void remove_maximal_simplex(vector[int] simplex) bool prune_above_filtration(double filtration) bool make_filtration_non_decreasing() + void compute_extended_filtration() + vector[vector[pair[int, pair[double, double]]]] compute_extended_persistence_subdiagrams(vector[pair[int, pair[double, double]]] dgm, double min_persistence) # Iterators over Simplex tree pair[vector[int], double] get_simplex_and_filtration(Simplex_tree_simplex_handle f_simplex) Simplex_tree_simplices_iterator get_simplices_iterator_begin() @@ -69,9 +70,12 @@ cdef extern from "Simplex_tree_interface.h" namespace "Gudhi": cdef extern from "Persistent_cohomology_interface.h" namespace "Gudhi": cdef cppclass Simplex_tree_persistence_interface "Gudhi::Persistent_cohomology_interface<Gudhi::Simplex_tree<Gudhi::Simplex_tree_options_full_featured>>": Simplex_tree_persistence_interface(Simplex_tree_interface_full_featured * st, bool persistence_dim_max) - vector[pair[int, pair[double, double]]] get_persistence(int homology_coeff_field, double min_persistence) + void compute_persistence(int homology_coeff_field, double min_persistence) + vector[pair[int, pair[double, double]]] get_persistence() vector[int] betti_numbers() vector[int] persistent_betti_numbers(double from_value, double to_value) vector[pair[double,double]] intervals_in_dimension(int dimension) - void write_output_diagram(string diagram_file_name) + void write_output_diagram(string diagram_file_name) except + vector[pair[vector[int], vector[int]]] persistence_pairs() + pair[vector[vector[int]], vector[vector[int]]] lower_star_generators() + pair[vector[vector[int]], vector[vector[int]]] flag_generators() |