diff options
Diffstat (limited to 'src/Bottleneck/include/gudhi/Graph_matching.h')
-rw-r--r-- | src/Bottleneck/include/gudhi/Graph_matching.h | 53 |
1 files changed, 27 insertions, 26 deletions
diff --git a/src/Bottleneck/include/gudhi/Graph_matching.h b/src/Bottleneck/include/gudhi/Graph_matching.h index ea47e1d5..4cd3180e 100644 --- a/src/Bottleneck/include/gudhi/Graph_matching.h +++ b/src/Bottleneck/include/gudhi/Graph_matching.h @@ -4,7 +4,7 @@ * * Author(s): Francois Godi * - * Copyright (C) 2015 INRIA Saclay (France) + * Copyright (C) 2015 INRIA Sophia-Antipolis (France) * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by @@ -34,11 +34,11 @@ namespace Gudhi { namespace bottleneck { template<typename Persistence_diagram1, typename Persistence_diagram2> -double bottleneck_distance(Persistence_diagram1& diag1, Persistence_diagram2& diag2, double e = 0.); +double bottleneck_distance(const Persistence_diagram1& diag1, const Persistence_diagram2& diag2, double e = 0.); class Graph_matching { public: - Graph_matching(const Persistence_diagrams_graph& g); + explicit Graph_matching(const Persistence_diagrams_graph& g); Graph_matching& operator=(const Graph_matching& m); bool perfect() const; bool multi_augment(); @@ -52,7 +52,7 @@ class Graph_matching { Layered_neighbors_finder* layering() const; bool augment(Layered_neighbors_finder* layered_nf, int u_start_index, int max_depth); - void update(std::deque<int>& path); + void update(std::deque<int>* path); }; Graph_matching::Graph_matching(const Persistence_diagrams_graph& g) @@ -128,36 +128,37 @@ Layered_neighbors_finder* Graph_matching::layering() const { } bool Graph_matching::augment(Layered_neighbors_finder *layered_nf, int u_start_index, int max_depth) { - std::deque<int> path; - path.emplace_back(u_start_index); + std::deque<int>* path = new std::deque<int>(); + path->emplace_back(u_start_index); // start is a point from U do { - if (static_cast<int>(path.size()) > max_depth) { - path.pop_back(); - path.pop_back(); + if (static_cast<int>(path->size()) > max_depth) { + path->pop_back(); + path->pop_back(); } - if (path.empty()) + if (path->empty()) return false; - int w = path.back(); - path.emplace_back(layered_nf->pull_near(w, path.size() / 2)); - while (path.back() == null_point_index()) { - path.pop_back(); - path.pop_back(); - if (path.empty()) + int w = path->back(); + path->emplace_back(layered_nf->pull_near(w, path->size() / 2)); + while (path->back() == null_point_index()) { + path->pop_back(); + path->pop_back(); + if (path->empty()) return false; - path.pop_back(); - path.emplace_back(layered_nf->pull_near(path.back(), path.size() / 2)); + path->pop_back(); + path->emplace_back(layered_nf->pull_near(path->back(), path->size() / 2)); } - path.emplace_back(v_to_u.at(path.back())); - } while (path.back() != null_point_index()); - path.pop_back(); + path->emplace_back(v_to_u.at(path->back())); + } while (path->back() != null_point_index()); + path->pop_back(); update(path); + delete path; return true; } -void Graph_matching::update(std::deque<int>& path) { - unmatched_in_u.remove(path.front()); - for (auto it = path.cbegin(); it != path.cend(); ++it) { +void Graph_matching::update(std::deque<int> *path) { + unmatched_in_u.remove(path->front()); + for (auto it = path->cbegin(); it != path->cend(); ++it) { int tmp = *it; ++it; v_to_u[*it] = tmp; @@ -165,14 +166,14 @@ void Graph_matching::update(std::deque<int>& path) { } template<typename Persistence_diagram1, typename Persistence_diagram2> -double bottleneck_distance(Persistence_diagram1& diag1, Persistence_diagram2& diag2, double e) { +double bottleneck_distance(const Persistence_diagram1 &diag1, const Persistence_diagram2 &diag2, double e) { Persistence_diagrams_graph g(diag1, diag2, e); std::vector<double>* sd = g.sorted_distances(); int idmin = 0; int idmax = sd->size() - 1; double alpha = pow(sd->size(), 0.25); Graph_matching m(g); - Graph_matching biggest_unperfect = m; + Graph_matching biggest_unperfect(g); while (idmin != idmax) { int pas = static_cast<int>((idmax - idmin) / alpha); m.set_r(sd->at(idmin + pas)); |