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-rw-r--r--src/Bottleneck_distance/include/gudhi/Graph_matching.h38
1 files changed, 15 insertions, 23 deletions
diff --git a/src/Bottleneck_distance/include/gudhi/Graph_matching.h b/src/Bottleneck_distance/include/gudhi/Graph_matching.h
index e1708c5b..f51e22e9 100644
--- a/src/Bottleneck_distance/include/gudhi/Graph_matching.h
+++ b/src/Bottleneck_distance/include/gudhi/Graph_matching.h
@@ -26,7 +26,8 @@
#include <gudhi/Neighbors_finder.h>
#include <vector>
-#include <list>
+#include <unordered_set>
+#include <algorithm>
namespace Gudhi {
@@ -40,8 +41,6 @@ class Graph_matching {
public:
/** \internal \brief Constructor constructing an empty matching. */
explicit Graph_matching(Persistence_graph &g);
- /** \internal \brief Copy operator. */
- Graph_matching& operator=(const Graph_matching& m);
/** \internal \brief Is the matching perfect ? */
bool perfect() const;
/** \internal \brief Augments the matching with a maximal set of edge-disjoint shortest augmenting paths. */
@@ -50,12 +49,12 @@ class Graph_matching {
void set_r(double r);
private:
- Persistence_graph& g;
+ Persistence_graph* gp;
double r;
/** \internal \brief Given a point from V, provides its matched point in U, null_point_index() if there isn't. */
std::vector<int> v_to_u;
/** \internal \brief All the unmatched points in U. */
- std::list<int> unmatched_in_u;
+ std::unordered_set<int> unmatched_in_u;
/** \internal \brief Provides a Layered_neighbors_finder dividing the graph in layers. Basically a BFS. */
Layered_neighbors_finder layering() const;
@@ -66,17 +65,9 @@ class Graph_matching {
};
inline Graph_matching::Graph_matching(Persistence_graph& g)
- : g(g), r(0.), v_to_u(g.size(), null_point_index()), unmatched_in_u() {
+ : gp(&g), r(0.), v_to_u(g.size(), null_point_index()), unmatched_in_u(g.size()) {
for (int u_point_index = 0; u_point_index < g.size(); ++u_point_index)
- unmatched_in_u.emplace_back(u_point_index);
-}
-
-inline Graph_matching& Graph_matching::operator=(const Graph_matching& m) {
- g = m.g;
- r = m.r;
- v_to_u = m.v_to_u;
- unmatched_in_u = m.unmatched_in_u;
- return *this;
+ unmatched_in_u.insert(u_point_index);
}
inline bool Graph_matching::perfect() const {
@@ -88,12 +79,12 @@ inline bool Graph_matching::multi_augment() {
return false;
Layered_neighbors_finder layered_nf(layering());
int max_depth = layered_nf.vlayers_number()*2 - 1;
- double rn = sqrt(g.size());
+ double rn = sqrt(gp->size());
// verification of a necessary criterion in order to shortcut if possible
if (max_depth < 0 || (unmatched_in_u.size() > rn && max_depth >= rn))
return false;
bool successful = false;
- std::list<int> tries(unmatched_in_u);
+ std::vector<int> tries(unmatched_in_u.cbegin(), unmatched_in_u.cend());
for (auto it = tries.cbegin(); it != tries.cend(); it++)
// 'augment' has side-effects which have to be always executed, don't change order
successful = augment(layered_nf, *it, max_depth) || successful;
@@ -133,12 +124,12 @@ inline bool Graph_matching::augment(Layered_neighbors_finder & layered_nf, int u
}
inline Layered_neighbors_finder Graph_matching::layering() const {
- std::list<int> u_vertices(unmatched_in_u);
- std::list<int> v_vertices;
- Neighbors_finder nf(g, r);
- for (int v_point_index = 0; v_point_index < g.size(); ++v_point_index)
+ std::vector<int> u_vertices(unmatched_in_u.cbegin(), unmatched_in_u.cend());
+ std::vector<int> v_vertices;
+ Neighbors_finder nf(*gp, r);
+ for (int v_point_index = 0; v_point_index < gp->size(); ++v_point_index)
nf.add(v_point_index);
- Layered_neighbors_finder layered_nf(g, r);
+ Layered_neighbors_finder layered_nf(*gp, r);
for (int layer = 0; !u_vertices.empty(); layer++) {
// one layer is one step in the BFS
for (auto it1 = u_vertices.cbegin(); it1 != u_vertices.cend(); ++it1) {
@@ -166,7 +157,8 @@ inline Layered_neighbors_finder Graph_matching::layering() const {
}
inline void Graph_matching::update(std::vector<int>& path) {
- unmatched_in_u.remove(path.front());
+ // Must return 1.
+ unmatched_in_u.erase(path.front());
for (auto it = path.cbegin(); it != path.cend(); ++it) {
// Be careful, the iterator is incremented twice each time
int tmp = *it;