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Diffstat (limited to 'src/Cech_complex/include/gudhi/Cech_complex_blocker.h')
-rw-r--r-- | src/Cech_complex/include/gudhi/Cech_complex_blocker.h | 85 |
1 files changed, 85 insertions, 0 deletions
diff --git a/src/Cech_complex/include/gudhi/Cech_complex_blocker.h b/src/Cech_complex/include/gudhi/Cech_complex_blocker.h new file mode 100644 index 00000000..647bf0b7 --- /dev/null +++ b/src/Cech_complex/include/gudhi/Cech_complex_blocker.h @@ -0,0 +1,85 @@ +/* This file is part of the Gudhi Library. The Gudhi library + * (Geometric Understanding in Higher Dimensions) is a generic C++ + * library for computational topology. + * + * Author(s): Vincent Rouvreau + * + * Copyright (C) 2018 Inria + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + */ + +#ifndef CECH_COMPLEX_BLOCKER_H_ +#define CECH_COMPLEX_BLOCKER_H_ + +#include <gudhi/graph_simplicial_complex.h> +#include <gudhi/Cech_complex.h> + +#include <Miniball/Miniball.hpp> + +#include <iostream> +#include <vector> +#include <cmath> // for std::sqrt + +namespace Gudhi { + +namespace cech_complex { + +// Just declaring Cech_complex class because used and not yet defined. +template<typename SimplicialComplexForCechComplex, typename ForwardPointRange> +class Cech_complex; + +template <typename SimplicialComplexForCech, typename ForwardPointRange> +class Cech_blocker { + private: + using Point = std::vector<double>; + using Point_cloud = std::vector<Point>; + using Point_iterator = Point_cloud::const_iterator; + using Coordinate_iterator = Point::const_iterator; + using Min_sphere = Miniball::Miniball<Miniball::CoordAccessor<Point_iterator, Coordinate_iterator>>; + using Simplex_handle = typename SimplicialComplexForCech::Simplex_handle; + using Filtration_value = typename SimplicialComplexForCech::Filtration_value; + using Cech_complex = Gudhi::cech_complex::Cech_complex<SimplicialComplexForCech, ForwardPointRange>; + + public: + bool operator()(Simplex_handle sh) { + Point_cloud points; + for (auto vertex : simplicial_complex_.simplex_vertex_range(sh)) { + points.push_back(cc_ptr_->point(vertex)); +#ifdef DEBUG_TRACES + std::cout << "#(" << vertex << ")#"; +#endif // DEBUG_TRACES + } + Min_sphere ms(cc_ptr_->dimension(), points.begin(),points.end()); + Filtration_value radius = std::sqrt(ms.squared_radius()); +#ifdef DEBUG_TRACES + std::cout << "radius = " << radius << " - " << (radius > cc_ptr_->threshold()) << std::endl; +#endif // DEBUG_TRACES + simplicial_complex_.assign_filtration(sh, radius); + return (radius > cc_ptr_->threshold()); + } + Cech_blocker(SimplicialComplexForCech& simplicial_complex, Cech_complex* cc_ptr) + : simplicial_complex_(simplicial_complex), + cc_ptr_(cc_ptr) { + } + private: + SimplicialComplexForCech simplicial_complex_; + Cech_complex* cc_ptr_; +}; + +} // namespace cech_complex + +} // namespace Gudhi + +#endif // CECH_COMPLEX_BLOCKER_H_ |