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-rw-r--r--src/Gudhi_stat/utilities/persistence_intervals/compute_birth_death_range_in_persistence_diagram.cpp4
-rw-r--r--src/Gudhi_stat/utilities/persistence_intervals/compute_bottleneck_distance.cpp4
-rw-r--r--src/Gudhi_stat/utilities/persistence_intervals/compute_number_of_dominant_intervals.cpp4
-rw-r--r--src/Gudhi_stat/utilities/persistence_intervals/plot_histogram_of_intervals_lengths.cpp4
-rw-r--r--src/Gudhi_stat/utilities/persistence_intervals/plot_persistence_Betti_numbers.cpp4
-rw-r--r--src/Gudhi_stat/utilities/persistence_intervals/plot_persistence_intervals.cpp11
6 files changed, 14 insertions, 17 deletions
diff --git a/src/Gudhi_stat/utilities/persistence_intervals/compute_birth_death_range_in_persistence_diagram.cpp b/src/Gudhi_stat/utilities/persistence_intervals/compute_birth_death_range_in_persistence_diagram.cpp
index 291bd557..2e0d680f 100644
--- a/src/Gudhi_stat/utilities/persistence_intervals/compute_birth_death_range_in_persistence_diagram.cpp
+++ b/src/Gudhi_stat/utilities/persistence_intervals/compute_birth_death_range_in_persistence_diagram.cpp
@@ -23,7 +23,7 @@
#include <gudhi/reader_utils.h>
-#include <gudhi/persistence_representations/Persistence_intervals.h>
+#include <gudhi/Persistence_intervals.h>
#include <iostream>
#include <vector>
@@ -32,7 +32,7 @@
using namespace Gudhi;
-using namespace Gudhi::Gudhi_stat;
+using namespace Gudhi::Persistence_representations;
int main( int argc , char** argv )
diff --git a/src/Gudhi_stat/utilities/persistence_intervals/compute_bottleneck_distance.cpp b/src/Gudhi_stat/utilities/persistence_intervals/compute_bottleneck_distance.cpp
index 43929695..19e49bbb 100644
--- a/src/Gudhi_stat/utilities/persistence_intervals/compute_bottleneck_distance.cpp
+++ b/src/Gudhi_stat/utilities/persistence_intervals/compute_bottleneck_distance.cpp
@@ -20,13 +20,13 @@
* along with this program. If not, see <http://www.gnu.org/licenses/>.
*/
-#include <gudhi/persistence_representations/Persistence_intervals_with_distances.h>
+#include <gudhi/Persistence_intervals_with_distances.h>
#include <gudhi/read_persistence_from_file.h>
using namespace Gudhi;
-using namespace Gudhi::Gudhi_stat;
+using namespace Gudhi::Persistence_representations;
#include <iostream>
#include <sstream>
diff --git a/src/Gudhi_stat/utilities/persistence_intervals/compute_number_of_dominant_intervals.cpp b/src/Gudhi_stat/utilities/persistence_intervals/compute_number_of_dominant_intervals.cpp
index 281902fe..c099befc 100644
--- a/src/Gudhi_stat/utilities/persistence_intervals/compute_number_of_dominant_intervals.cpp
+++ b/src/Gudhi_stat/utilities/persistence_intervals/compute_number_of_dominant_intervals.cpp
@@ -23,14 +23,14 @@
#include <gudhi/reader_utils.h>
-#include <gudhi/persistence_representations/Persistence_intervals.h>
+#include <gudhi/Persistence_intervals.h>
#include <iostream>
using namespace Gudhi;
-using namespace Gudhi::Gudhi_stat;
+using namespace Gudhi::Persistence_representations;
int main( int argc , char** argv )
diff --git a/src/Gudhi_stat/utilities/persistence_intervals/plot_histogram_of_intervals_lengths.cpp b/src/Gudhi_stat/utilities/persistence_intervals/plot_histogram_of_intervals_lengths.cpp
index 994c6913..b2cbac70 100644
--- a/src/Gudhi_stat/utilities/persistence_intervals/plot_histogram_of_intervals_lengths.cpp
+++ b/src/Gudhi_stat/utilities/persistence_intervals/plot_histogram_of_intervals_lengths.cpp
@@ -23,14 +23,14 @@
#include <gudhi/reader_utils.h>
-#include <gudhi/persistence_representations/Persistence_intervals.h>
+#include <gudhi/Persistence_intervals.h>
#include <iostream>
using namespace Gudhi;
-using namespace Gudhi::Gudhi_stat;
+using namespace Gudhi::Persistence_representations;
int main( int argc , char** argv )
diff --git a/src/Gudhi_stat/utilities/persistence_intervals/plot_persistence_Betti_numbers.cpp b/src/Gudhi_stat/utilities/persistence_intervals/plot_persistence_Betti_numbers.cpp
index 21ba06f4..e20f85c0 100644
--- a/src/Gudhi_stat/utilities/persistence_intervals/plot_persistence_Betti_numbers.cpp
+++ b/src/Gudhi_stat/utilities/persistence_intervals/plot_persistence_Betti_numbers.cpp
@@ -23,14 +23,14 @@
#include <gudhi/reader_utils.h>
-#include <gudhi/persistence_representations/Persistence_intervals.h>
+#include <gudhi/Persistence_intervals.h>
#include <iostream>
using namespace Gudhi;
-using namespace Gudhi::Gudhi_stat;
+using namespace Gudhi::Persistence_representations;
int main( int argc , char** argv )
diff --git a/src/Gudhi_stat/utilities/persistence_intervals/plot_persistence_intervals.cpp b/src/Gudhi_stat/utilities/persistence_intervals/plot_persistence_intervals.cpp
index 95c0cf1f..ed03459b 100644
--- a/src/Gudhi_stat/utilities/persistence_intervals/plot_persistence_intervals.cpp
+++ b/src/Gudhi_stat/utilities/persistence_intervals/plot_persistence_intervals.cpp
@@ -23,7 +23,7 @@
#include <gudhi/reader_utils.h>
-#include <gudhi/persistence_representations/Persistence_intervals.h>
+#include <gudhi/Persistence_intervals.h>
#include <gudhi/read_persistence_from_file.h>
#include <iostream>
@@ -31,7 +31,7 @@
using namespace Gudhi;
-using namespace Gudhi::Gudhi_stat;
+using namespace Gudhi::Persistence_representations;
double epsilon = 0.0000005;
@@ -39,7 +39,7 @@ double epsilon = 0.0000005;
int main( int argc , char** argv )
{
- if ( argc != 2 )
+ if ( argc < 2 )
{
std::cout << "To run this program, please provide the name of a file with persistence diagram \n";
std::cout << "The second optional parameter of a program is the dimension of the persistence that is to be used. If your file contains only birth-death pairs, you can skip this parameter\n";
@@ -54,10 +54,7 @@ int main( int argc , char** argv )
if ( dim >= 0 )
{
dimension = (unsigned)dim;
- }
-
-
-
+ }
std::vector< std::pair< double , double > > intervals = read_persistence_intervals_in_one_dimension_from_file( argv[1] , dimension );
Persistence_intervals b( intervals );
b.plot( argv[1] );