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-rw-r--r--src/Rips_complex/include/gudhi/Rips_complex.h21
1 files changed, 8 insertions, 13 deletions
diff --git a/src/Rips_complex/include/gudhi/Rips_complex.h b/src/Rips_complex/include/gudhi/Rips_complex.h
index 63207892..f98a6993 100644
--- a/src/Rips_complex/include/gudhi/Rips_complex.h
+++ b/src/Rips_complex/include/gudhi/Rips_complex.h
@@ -64,7 +64,6 @@ class Rips_complex {
typedef int Vertex_handle;
public:
-
/** \brief Rips_complex constructor from a list of points.
*
* @param[in] points Range of points.
@@ -87,7 +86,7 @@ class Rips_complex {
*/
template<typename InputDistanceRange>
Rips_complex(const InputDistanceRange& distance_matrix, Filtration_value threshold) {
- compute_proximity_graph(boost::irange((size_t)0,distance_matrix.size()), threshold,
+ compute_proximity_graph(boost::irange((size_t)0, distance_matrix.size()), threshold,
[&](size_t i, size_t j){return distance_matrix[j][i];});
}
@@ -106,7 +105,7 @@ class Rips_complex {
bool create_complex(SimplicialComplexForRips& complex, int dim_max) {
if (complex.num_vertices() > 0) {
std::cerr << "Rips_complex create_complex - complex is not empty\n";
- return false; // ----- >>
+ return false; // ----- >>
}
// insert the proximity graph in the simplicial complex
@@ -118,7 +117,7 @@ class Rips_complex {
return true;
}
- public:
+ private:
/** \brief Output the proximity graph of the points.
*
* If points contains n elements, the proximity graph is the graph
@@ -133,20 +132,17 @@ class Rips_complex {
Distance distance) {
std::vector< std::pair< Vertex_handle, Vertex_handle > > edges;
std::vector< Filtration_value > edges_fil;
- std::map< Vertex_handle, Filtration_value > vertices;
// Compute the proximity graph of the points.
// If points contains n elements, the proximity graph is the graph with n vertices, and an edge [u,v] iff the
// distance function between points u and v is smaller than threshold.
// --------------------------------------------------------------------------------------------
// Creates the vector of edges and its filtration values (returned by distance function)
- Vertex_handle idx_u, idx_v;
- Filtration_value fil;
- idx_u = 0;
+ Vertex_handle idx_u = 0;
for (auto it_u = std::begin(points); it_u != std::end(points); ++it_u) {
- idx_v = idx_u + 1;
+ Vertex_handle idx_v = idx_u + 1;
for (auto it_v = it_u + 1; it_v != std::end(points); ++it_v, ++idx_v) {
- fil = distance(*it_u, *it_v);
+ Filtration_value fil = distance(*it_u, *it_v);
if (fil <= threshold) {
edges.emplace_back(idx_u, idx_v);
edges_fil.push_back(fil);
@@ -172,11 +168,10 @@ class Rips_complex {
private:
Graph_t rips_skeleton_graph_;
-
};
-} // namespace rips_complex
+} // namespace rips_complex
-} // namespace Gudhi
+} // namespace Gudhi
#endif // RIPS_COMPLEX_H_