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-rw-r--r--src/cmake/modules/GUDHI_third_party_libraries.cmake217
1 files changed, 95 insertions, 122 deletions
diff --git a/src/cmake/modules/GUDHI_third_party_libraries.cmake b/src/cmake/modules/GUDHI_third_party_libraries.cmake
index a56a2756..7c982b3b 100644
--- a/src/cmake/modules/GUDHI_third_party_libraries.cmake
+++ b/src/cmake/modules/GUDHI_third_party_libraries.cmake
@@ -1,42 +1,14 @@
# This files manage third party libraries required by GUDHI
-find_package(Boost 1.56.0 REQUIRED COMPONENTS system filesystem unit_test_framework program_options thread)
+find_package(Boost 1.66.0 QUIET OPTIONAL_COMPONENTS filesystem unit_test_framework program_options)
-if(NOT Boost_FOUND)
+# Boost_FOUND is not reliable
+if(NOT Boost_VERSION)
message(FATAL_ERROR "NOTICE: This program requires Boost and will not be compiled.")
-endif(NOT Boost_FOUND)
-
-# cf. https://cliutils.gitlab.io/modern-cmake/chapters/packages/Boost.html
-# This is needed if your Boost version is newer than your CMake version
-# or if you have an old version of CMake (<3.5)
-if(NOT TARGET Boost::program_options)
- add_library(Boost::program_options IMPORTED INTERFACE)
- set_property(TARGET Boost::program_options PROPERTY
- INTERFACE_INCLUDE_DIRECTORIES ${Boost_INCLUDE_DIR})
- set_property(TARGET Boost::program_options PROPERTY
- INTERFACE_LINK_LIBRARIES ${Boost_LIBRARIES})
-endif()
-if(NOT TARGET Boost::filesystem)
- add_library(Boost::filesystem IMPORTED INTERFACE)
- set_property(TARGET Boost::filesystem PROPERTY
- INTERFACE_INCLUDE_DIRECTORIES ${Boost_INCLUDE_DIR})
- set_property(TARGET Boost::filesystem PROPERTY
- INTERFACE_LINK_LIBRARIES ${Boost_LIBRARIES})
-endif()
-if(NOT TARGET Boost::unit_test_framework)
- add_library(Boost::unit_test_framework IMPORTED INTERFACE)
- set_property(TARGET Boost::unit_test_framework PROPERTY
- INTERFACE_INCLUDE_DIRECTORIES ${Boost_INCLUDE_DIR})
- set_property(TARGET Boost::unit_test_framework PROPERTY
- INTERFACE_LINK_LIBRARIES ${Boost_LIBRARIES})
-endif()
-if(NOT TARGET Boost::system)
- add_library(Boost::system IMPORTED INTERFACE)
- set_property(TARGET Boost::system PROPERTY
- INTERFACE_INCLUDE_DIRECTORIES ${Boost_INCLUDE_DIR})
- set_property(TARGET Boost::system PROPERTY
- INTERFACE_LINK_LIBRARIES ${Boost_LIBRARIES})
-endif()
+endif(NOT Boost_VERSION)
+include_directories(${Boost_INCLUDE_DIRS})
+message(STATUS "boost include dirs:" ${Boost_INCLUDE_DIRS})
+message(STATUS "boost library dirs:" ${Boost_LIBRARY_DIRS})
find_package(GMP)
if(GMP_FOUND)
@@ -120,91 +92,92 @@ add_definitions( -DBOOST_ALL_DYN_LINK )
# problem on Mac with boost_system and boost_thread
add_definitions( -DBOOST_SYSTEM_NO_DEPRECATED )
-message(STATUS "boost include dirs:" ${Boost_INCLUDE_DIRS})
-message(STATUS "boost library dirs:" ${Boost_LIBRARY_DIRS})
-
-# Find the correct Python interpreter.
-# Can be set with -DPYTHON_EXECUTABLE=/usr/bin/python3 or -DPython_ADDITIONAL_VERSIONS=3 for instance.
-find_package( PythonInterp )
-
-# find_python_module tries to import module in Python interpreter and to retrieve its version number
-# returns ${PYTHON_MODULE_NAME_UP}_VERSION and ${PYTHON_MODULE_NAME_UP}_FOUND
-function( find_python_module PYTHON_MODULE_NAME )
- string(TOUPPER ${PYTHON_MODULE_NAME} PYTHON_MODULE_NAME_UP)
- execute_process(
- COMMAND ${PYTHON_EXECUTABLE} -c "import ${PYTHON_MODULE_NAME}; print(${PYTHON_MODULE_NAME}.__version__)"
- RESULT_VARIABLE PYTHON_MODULE_RESULT
- OUTPUT_VARIABLE PYTHON_MODULE_VERSION
- ERROR_VARIABLE PYTHON_MODULE_ERROR)
- if(PYTHON_MODULE_RESULT EQUAL 0)
- # Remove carriage return
- string(STRIP ${PYTHON_MODULE_VERSION} PYTHON_MODULE_VERSION)
- message ("++ Python module ${PYTHON_MODULE_NAME} - Version ${PYTHON_MODULE_VERSION} found")
-
- set(${PYTHON_MODULE_NAME_UP}_VERSION ${PYTHON_MODULE_VERSION} PARENT_SCOPE)
- set(${PYTHON_MODULE_NAME_UP}_FOUND TRUE PARENT_SCOPE)
- else()
- message ("PYTHON_MODULE_NAME = ${PYTHON_MODULE_NAME}
- - PYTHON_MODULE_RESULT = ${PYTHON_MODULE_RESULT}
- - PYTHON_MODULE_VERSION = ${PYTHON_MODULE_VERSION}
- - PYTHON_MODULE_ERROR = ${PYTHON_MODULE_ERROR}")
- unset(${PYTHON_MODULE_NAME_UP}_VERSION PARENT_SCOPE)
- set(${PYTHON_MODULE_NAME_UP}_FOUND FALSE PARENT_SCOPE)
- endif()
-endfunction( find_python_module )
-
-# For modules that do not define module.__version__
-function( find_python_module_no_version PYTHON_MODULE_NAME )
- string(TOUPPER ${PYTHON_MODULE_NAME} PYTHON_MODULE_NAME_UP)
- execute_process(
- COMMAND ${PYTHON_EXECUTABLE} -c "import ${PYTHON_MODULE_NAME}"
- RESULT_VARIABLE PYTHON_MODULE_RESULT
- ERROR_VARIABLE PYTHON_MODULE_ERROR)
- if(PYTHON_MODULE_RESULT EQUAL 0)
- # Remove carriage return
- message ("++ Python module ${PYTHON_MODULE_NAME} found")
- set(${PYTHON_MODULE_NAME_UP}_FOUND TRUE PARENT_SCOPE)
- else()
- message ("PYTHON_MODULE_NAME = ${PYTHON_MODULE_NAME}
- - PYTHON_MODULE_RESULT = ${PYTHON_MODULE_RESULT}
- - PYTHON_MODULE_ERROR = ${PYTHON_MODULE_ERROR}")
- set(${PYTHON_MODULE_NAME_UP}_FOUND FALSE PARENT_SCOPE)
+if (WITH_GUDHI_PYTHON)
+ # Find the correct Python interpreter.
+ # Can be set with -DPYTHON_EXECUTABLE=/usr/bin/python3 or -DPython_ADDITIONAL_VERSIONS=3 for instance.
+ find_package( PythonInterp )
+
+ # find_python_module tries to import module in Python interpreter and to retrieve its version number
+ # returns ${PYTHON_MODULE_NAME_UP}_VERSION and ${PYTHON_MODULE_NAME_UP}_FOUND
+ function( find_python_module PYTHON_MODULE_NAME )
+ string(TOUPPER ${PYTHON_MODULE_NAME} PYTHON_MODULE_NAME_UP)
+ execute_process(
+ COMMAND ${PYTHON_EXECUTABLE} -c "import ${PYTHON_MODULE_NAME}; print(${PYTHON_MODULE_NAME}.__version__)"
+ RESULT_VARIABLE PYTHON_MODULE_RESULT
+ OUTPUT_VARIABLE PYTHON_MODULE_VERSION
+ ERROR_VARIABLE PYTHON_MODULE_ERROR)
+ if(PYTHON_MODULE_RESULT EQUAL 0)
+ # Remove all carriage returns as it can be multiline
+ string(REGEX REPLACE "\n" " " PYTHON_MODULE_VERSION "${PYTHON_MODULE_VERSION}")
+ message ("++ Python module ${PYTHON_MODULE_NAME} - Version ${PYTHON_MODULE_VERSION} found")
+
+ set(${PYTHON_MODULE_NAME_UP}_VERSION ${PYTHON_MODULE_VERSION} PARENT_SCOPE)
+ set(${PYTHON_MODULE_NAME_UP}_FOUND TRUE PARENT_SCOPE)
+ else()
+ message ("PYTHON_MODULE_NAME = ${PYTHON_MODULE_NAME}
+ - PYTHON_MODULE_RESULT = ${PYTHON_MODULE_RESULT}
+ - PYTHON_MODULE_VERSION = ${PYTHON_MODULE_VERSION}
+ - PYTHON_MODULE_ERROR = ${PYTHON_MODULE_ERROR}")
+ unset(${PYTHON_MODULE_NAME_UP}_VERSION PARENT_SCOPE)
+ set(${PYTHON_MODULE_NAME_UP}_FOUND FALSE PARENT_SCOPE)
+ endif()
+ endfunction( find_python_module )
+
+ # For modules that do not define module.__version__
+ function( find_python_module_no_version PYTHON_MODULE_NAME )
+ string(TOUPPER ${PYTHON_MODULE_NAME} PYTHON_MODULE_NAME_UP)
+ execute_process(
+ COMMAND ${PYTHON_EXECUTABLE} -c "import ${PYTHON_MODULE_NAME}"
+ RESULT_VARIABLE PYTHON_MODULE_RESULT
+ ERROR_VARIABLE PYTHON_MODULE_ERROR)
+ if(PYTHON_MODULE_RESULT EQUAL 0)
+ # Remove carriage return
+ message ("++ Python module ${PYTHON_MODULE_NAME} found")
+ set(${PYTHON_MODULE_NAME_UP}_FOUND TRUE PARENT_SCOPE)
+ else()
+ message ("PYTHON_MODULE_NAME = ${PYTHON_MODULE_NAME}
+ - PYTHON_MODULE_RESULT = ${PYTHON_MODULE_RESULT}
+ - PYTHON_MODULE_ERROR = ${PYTHON_MODULE_ERROR}")
+ set(${PYTHON_MODULE_NAME_UP}_FOUND FALSE PARENT_SCOPE)
+ endif()
+ endfunction( find_python_module_no_version )
+
+ if( PYTHONINTERP_FOUND )
+ find_python_module("cython")
+ find_python_module("pytest")
+ find_python_module("matplotlib")
+ find_python_module("numpy")
+ find_python_module("scipy")
+ find_python_module("sphinx")
+ find_python_module("sklearn")
+ find_python_module("ot")
+ find_python_module("pybind11")
+ find_python_module("torch")
+ find_python_module("pykeops")
+ find_python_module("eagerpy")
+ find_python_module_no_version("hnswlib")
+ find_python_module("tensorflow")
+ find_python_module("sphinx_paramlinks")
+ find_python_module_no_version("python_docs_theme")
endif()
-endfunction( find_python_module_no_version )
-
-if( PYTHONINTERP_FOUND )
- find_python_module("cython")
- find_python_module("pytest")
- find_python_module("matplotlib")
- find_python_module("numpy")
- find_python_module("scipy")
- find_python_module("sphinx")
- find_python_module("sklearn")
- find_python_module("ot")
- find_python_module("pybind11")
- find_python_module("torch")
- find_python_module("pykeops")
- find_python_module("eagerpy")
- find_python_module_no_version("hnswlib")
-endif()
-
-if(NOT GUDHI_PYTHON_PATH)
- message(FATAL_ERROR "ERROR: GUDHI_PYTHON_PATH is not valid.")
-endif(NOT GUDHI_PYTHON_PATH)
-
-option(WITH_GUDHI_PYTHON_RUNTIME_LIBRARY_DIRS "Build with setting runtime_library_dirs. Usefull when setting rpath is not allowed" ON)
-
-if(PYTHONINTERP_FOUND AND CYTHON_FOUND)
- if(SPHINX_FOUND)
- # Documentation generation is available through sphinx
- find_program( SPHINX_PATH sphinx-build )
-
- if(NOT SPHINX_PATH)
- if(PYTHON_VERSION_MAJOR EQUAL 3)
- # In Python3, just hack sphinx-build if it does not exist
- set(SPHINX_PATH "${PYTHON_EXECUTABLE}" "-m" "sphinx.cmd.build")
- endif(PYTHON_VERSION_MAJOR EQUAL 3)
- endif(NOT SPHINX_PATH)
- endif(SPHINX_FOUND)
-endif(PYTHONINTERP_FOUND AND CYTHON_FOUND)
-
+
+ if(NOT GUDHI_PYTHON_PATH)
+ message(FATAL_ERROR "ERROR: GUDHI_PYTHON_PATH is not valid.")
+ endif(NOT GUDHI_PYTHON_PATH)
+
+ option(WITH_GUDHI_PYTHON_RUNTIME_LIBRARY_DIRS "Build with setting runtime_library_dirs. Usefull when setting rpath is not allowed" ON)
+
+ if(PYTHONINTERP_FOUND AND CYTHON_FOUND)
+ if(SPHINX_FOUND)
+ # Documentation generation is available through sphinx
+ find_program( SPHINX_PATH sphinx-build )
+
+ if(NOT SPHINX_PATH)
+ if(PYTHON_VERSION_MAJOR EQUAL 3)
+ # In Python3, just hack sphinx-build if it does not exist
+ set(SPHINX_PATH "${PYTHON_EXECUTABLE}" "-m" "sphinx.cmd.build")
+ endif(PYTHON_VERSION_MAJOR EQUAL 3)
+ endif(NOT SPHINX_PATH)
+ endif(SPHINX_FOUND)
+ endif(PYTHONINTERP_FOUND AND CYTHON_FOUND)
+endif (WITH_GUDHI_PYTHON)