diff options
Diffstat (limited to 'src/common')
-rw-r--r-- | src/common/doc/header.html | 2 | ||||
-rw-r--r-- | src/common/doc/offline_header.html | 41 | ||||
-rw-r--r-- | src/common/example/CMakeLists.txt | 11 | ||||
-rw-r--r-- | src/common/example/example_CGAL_3D_points_off_reader.cpp | 6 | ||||
-rw-r--r-- | src/common/example/example_CGAL_points_off_reader.cpp | 6 | ||||
-rw-r--r-- | src/common/example/example_vector_double_points_off_reader.cpp | 14 | ||||
-rw-r--r-- | src/common/example/vectordoubleoffreader_result.txt (renamed from src/common/example/cgaloffreader_result.txt) | 0 | ||||
-rw-r--r-- | src/common/include/gudhi/Off_reader.h | 29 | ||||
-rw-r--r-- | src/common/include/gudhi/Points_off_io.h | 4 | ||||
-rw-r--r-- | src/common/utilities/pointsetgenerator.md | 16 |
10 files changed, 97 insertions, 32 deletions
diff --git a/src/common/doc/header.html b/src/common/doc/header.html index d69b28fa..2f54e68d 100644 --- a/src/common/doc/header.html +++ b/src/common/doc/header.html @@ -9,7 +9,7 @@ <!--BEGIN PROJECT_NAME--><title>$projectname: $title</title><!--END PROJECT_NAME--> <!--BEGIN !PROJECT_NAME--><title>$title</title><!--END !PROJECT_NAME--> <!-- GUDHI website css for header BEGIN --> -<link rel="stylesheet" type="text/css" href="http://pages.saclay.inria.fr/vincent.rouvreau/gudhi/gudhi-doc-2.0.0/assets/css/styles_feeling_responsive.css" /> +<link rel="stylesheet" type="text/css" href="http://gudhi.gforge.inria.fr/assets/css/styles_feeling_responsive.css" /> <!-- GUDHI website css for header END --> <link href="$relpath^tabs.css" rel="stylesheet" type="text/css"/> <script type="text/javascript" src="$relpath^jquery.js"></script> diff --git a/src/common/doc/offline_header.html b/src/common/doc/offline_header.html new file mode 100644 index 00000000..6a02a895 --- /dev/null +++ b/src/common/doc/offline_header.html @@ -0,0 +1,41 @@ +<!-- HTML header for doxygen 1.8.6--> +<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd"> +<!-- GUDHI website : class="no-js" lang="en" is necessary --> +<html xmlns="http://www.w3.org/1999/xhtml" class="no-js" lang="en"> +<head> +<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/> +<meta http-equiv="X-UA-Compatible" content="IE=9"/> +<meta name="generator" content="Doxygen $doxygenversion"/> +<!--BEGIN PROJECT_NAME--><title>$projectname: $title</title><!--END PROJECT_NAME--> +<!--BEGIN !PROJECT_NAME--><title>$title</title><!--END !PROJECT_NAME--> +<!-- GUDHI website css for header END --> +<link href="$relpath^tabs.css" rel="stylesheet" type="text/css"/> +<script type="text/javascript" src="$relpath^jquery.js"></script> +<script type="text/javascript" src="$relpath^dynsections.js"></script> +$treeview +$search +$mathjax +<link href="$relpath^$stylesheet" rel="stylesheet" type="text/css" /> +$extrastylesheet +</head> +<body> + + +<div id="top"><!-- do not remove this div, it is closed by doxygen! --> + +<!--BEGIN TITLEAREA--> +<div id="titlearea"> +<table cellspacing="0" cellpadding="0"> + <tbody> + <tr style="height: 30px;"> + <!--BEGIN DISABLE_INDEX--> + <!--BEGIN SEARCHENGINE--> + <td>$searchbox</td> + <!--END SEARCHENGINE--> + <!--END DISABLE_INDEX--> + </tr> + </tbody> +</table> +</div> +<!--END TITLEAREA--> +<!-- end header part --> diff --git a/src/common/example/CMakeLists.txt b/src/common/example/CMakeLists.txt index afe865d4..1273c699 100644 --- a/src/common/example/CMakeLists.txt +++ b/src/common/example/CMakeLists.txt @@ -3,11 +3,20 @@ project(Common_examples) add_executable ( vector_double_off_reader example_vector_double_points_off_reader.cpp ) target_link_libraries(vector_double_off_reader ${CGAL_LIBRARY}) +file(COPY "${CMAKE_SOURCE_DIR}/data/points/alphacomplexdoc.off" DESTINATION ${CMAKE_CURRENT_BINARY_DIR}/) add_test(NAME Common_example_vector_double_off_reader COMMAND $<TARGET_FILE:vector_double_off_reader> - "${CMAKE_SOURCE_DIR}/data/points/SO3_10000.off") + "alphacomplexdoc.off") install(TARGETS vector_double_off_reader DESTINATION bin) +if (DIFF_PATH) + # Do not forget to copy test results files in current binary dir + file(COPY "vectordoubleoffreader_result.txt" DESTINATION ${CMAKE_CURRENT_BINARY_DIR}/) + + add_test(Common_example_vector_double_off_reader_diff_files ${DIFF_PATH} + ${CMAKE_CURRENT_BINARY_DIR}/vectordoubleoffreader_result.txt ${CMAKE_CURRENT_BINARY_DIR}/alphacomplexdoc.off.txt) +endif() + if(CGAL_FOUND) add_executable ( cgal_3D_off_reader example_CGAL_3D_points_off_reader.cpp ) target_link_libraries(cgal_3D_off_reader ${CGAL_LIBRARY}) diff --git a/src/common/example/example_CGAL_3D_points_off_reader.cpp b/src/common/example/example_CGAL_3D_points_off_reader.cpp index 665b7a29..4658d8d5 100644 --- a/src/common/example/example_CGAL_3D_points_off_reader.cpp +++ b/src/common/example/example_CGAL_3D_points_off_reader.cpp @@ -20,12 +20,12 @@ int main(int argc, char **argv) { usage(argv[0]); } - std::string offInputFile(argv[1]); + std::string off_input_file(argv[1]); // Read the OFF file (input file name given as parameter) and triangulate points - Gudhi::Points_3D_off_reader<Point_3> off_reader(offInputFile); + Gudhi::Points_3D_off_reader<Point_3> off_reader(off_input_file); // Check the read operation was correct if (!off_reader.is_valid()) { - std::cerr << "Unable to read file " << offInputFile << std::endl; + std::cerr << "Unable to read file " << off_input_file << std::endl; usage(argv[0]); } diff --git a/src/common/example/example_CGAL_points_off_reader.cpp b/src/common/example/example_CGAL_points_off_reader.cpp index 8c6a6b54..f45683a5 100644 --- a/src/common/example/example_CGAL_points_off_reader.cpp +++ b/src/common/example/example_CGAL_points_off_reader.cpp @@ -22,12 +22,12 @@ int main(int argc, char **argv) { usage(argv[0]); } - std::string offInputFile(argv[1]); + std::string off_input_file(argv[1]); // Read the OFF file (input file name given as parameter) and triangulate points - Gudhi::Points_off_reader<Point_d> off_reader(offInputFile); + Gudhi::Points_off_reader<Point_d> off_reader(off_input_file); // Check the read operation was correct if (!off_reader.is_valid()) { - std::cerr << "Unable to read file " << offInputFile << std::endl; + std::cerr << "Unable to read file " << off_input_file << std::endl; usage(argv[0]); } diff --git a/src/common/example/example_vector_double_points_off_reader.cpp b/src/common/example/example_vector_double_points_off_reader.cpp index 8aecb26e..5093da85 100644 --- a/src/common/example/example_vector_double_points_off_reader.cpp +++ b/src/common/example/example_vector_double_points_off_reader.cpp @@ -17,25 +17,27 @@ int main(int argc, char **argv) { usage(argv[0]); } - std::string offInputFile(argv[1]); + std::string off_input_file(argv[1]); // Read the OFF file (input file name given as parameter) and triangulate points - Gudhi::Points_off_reader<Point_d> off_reader(offInputFile); + Gudhi::Points_off_reader<Point_d> off_reader(off_input_file); // Check the read operation was correct if (!off_reader.is_valid()) { - std::cerr << "Unable to read file " << offInputFile << std::endl; + std::cerr << "Unable to read file " << off_input_file << std::endl; usage(argv[0]); } // Retrieve the triangulation std::vector<Point_d> point_cloud = off_reader.get_point_cloud(); + std::ofstream output_file(off_input_file + ".txt"); int n {0}; for (auto point : point_cloud) { - std::cout << "Point[" << n << "] = "; + output_file << "Point[" << n << "] = "; for (std::size_t i {0}; i < point.size(); i++) - std::cout << point[i] << " "; - std::cout << "\n"; + output_file << point[i] << " "; + output_file << "\n"; ++n; } + output_file.close(); return 0; } diff --git a/src/common/example/cgaloffreader_result.txt b/src/common/example/vectordoubleoffreader_result.txt index 1deb8dbd..1deb8dbd 100644 --- a/src/common/example/cgaloffreader_result.txt +++ b/src/common/example/vectordoubleoffreader_result.txt diff --git a/src/common/include/gudhi/Off_reader.h b/src/common/include/gudhi/Off_reader.h index 4fcd2af2..32320e4d 100644 --- a/src/common/include/gudhi/Off_reader.h +++ b/src/common/include/gudhi/Off_reader.h @@ -105,25 +105,26 @@ class Off_reader { bool is_off_file = (line.find("OFF") != std::string::npos); bool is_noff_file = (line.find("nOFF") != std::string::npos); + + if (!is_off_file && !is_noff_file) { std::cerr << line << std::endl; std::cerr << "missing off header\n"; return false; } + if (is_noff_file) { + // Should be on a separate line, but we accept it on the same line as the number of vertices + stream_ >> off_info_.dim; + } else { + off_info_.dim = 3; + } + if (!goto_next_uncomment_line(line)) return false; std::istringstream iss(line); - if ((is_off_file) && (!is_noff_file)) { - off_info_.dim = 3; - if (!(iss >> off_info_.num_vertices >> off_info_.num_faces >> off_info_.num_edges)) { - std::cerr << "incorrect number of vertices/faces/edges\n"; - return false; - } - } else { - if (!(iss >> off_info_.dim >> off_info_.num_vertices >> off_info_.num_faces >> off_info_.num_edges)) { + if (!(iss >> off_info_.num_vertices >> off_info_.num_faces >> off_info_.num_edges)) { std::cerr << "incorrect number of vertices/faces/edges\n"; return false; - } } off_visitor.init(off_info_.dim, off_info_.num_vertices, off_info_.num_faces, off_info_.num_edges); @@ -131,10 +132,12 @@ class Off_reader { } bool goto_next_uncomment_line(std::string& uncomment_line) { - uncomment_line.clear(); - do - std::getline(stream_, uncomment_line); while (uncomment_line[0] == '%'); - return (uncomment_line.size() > 0 && uncomment_line[0] != '%'); + do { + // skip whitespace, including empty lines + if (!std::ifstream::sentry(stream_)) return false; + std::getline(stream_, uncomment_line); + } while (uncomment_line[0] == '#'); + return (bool)stream_; } template<typename OffVisitor> diff --git a/src/common/include/gudhi/Points_off_io.h b/src/common/include/gudhi/Points_off_io.h index 29af8a8a..08f324c6 100644 --- a/src/common/include/gudhi/Points_off_io.h +++ b/src/common/include/gudhi/Points_off_io.h @@ -126,9 +126,9 @@ class Points_off_visitor_reader { * \code $> ./vector_double_off_reader ../../data/points/alphacomplexdoc.off * \endcode * - * the program output is: + * the program outputs a file ../../data/points/alphacomplexdoc.off.txt: * - * \include common/cgaloffreader_result.txt + * \include common/vectordoubleoffreader_result.txt */ template<typename Point_d> class Points_off_reader { diff --git a/src/common/utilities/pointsetgenerator.md b/src/common/utilities/pointsetgenerator.md index 284715d4..3b23e668 100644 --- a/src/common/utilities/pointsetgenerator.md +++ b/src/common/utilities/pointsetgenerator.md @@ -1,6 +1,16 @@ - - -# common # +--- +layout: page +title: "OFF point set generator" +meta_title: "OFF point set generator" +teaser: "" +permalink: /pointsetgenerator/ +--- +{::comment} +Leave the lines above as it is required by the web site generator 'Jekyll' +{:/comment} + + +# Miscellaneous # ## off_file_from_shape_generator ## |