summaryrefslogtreecommitdiff
path: root/src/cython/example/witness_complex_from_file_example.py
diff options
context:
space:
mode:
Diffstat (limited to 'src/cython/example/witness_complex_from_file_example.py')
-rwxr-xr-xsrc/cython/example/witness_complex_from_file_example.py56
1 files changed, 0 insertions, 56 deletions
diff --git a/src/cython/example/witness_complex_from_file_example.py b/src/cython/example/witness_complex_from_file_example.py
deleted file mode 100755
index 82a5b49a..00000000
--- a/src/cython/example/witness_complex_from_file_example.py
+++ /dev/null
@@ -1,56 +0,0 @@
-#!/usr/bin/env python
-
-import gudhi
-import pandas
-import argparse
-
-"""This file is part of the Gudhi Library. The Gudhi library
- (Geometric Understanding in Higher Dimensions) is a generic C++
- library for computational topology.
-
- Author(s): Vincent Rouvreau
-
- Copyright (C) 2016 INRIA
-
- This program is free software: you can redistribute it and/or modify
- it under the terms of the GNU General Public License as published by
- the Free Software Foundation, either version 3 of the License, or
- (at your option) any later version.
-
- This program is distributed in the hope that it will be useful,
- but WITHOUT ANY WARRANTY; without even the implied warranty of
- MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
- GNU General Public License for more details.
-
- You should have received a copy of the GNU General Public License
- along with this program. If not, see <http://www.gnu.org/licenses/>.
-"""
-
-__author__ = "Vincent Rouvreau"
-__copyright__ = "Copyright (C) 2016 INRIA"
-__license__ = "GPL v3"
-
-print("#####################################################################")
-print("WitnessComplex creation from points read in a file")
-
-parser = argparse.ArgumentParser(description='WitnessComplex creation from '
- 'points read in a file.',
- epilog='Example: '
- 'example/witness_complex_from_file_example.py'
- ' data/2000_random_points_on_3D_Torus.csv '
- '- Constructs a witness complex with the '
- 'points from the given file. File format '
- 'is X1, X2, ..., Xn')
-parser.add_argument('file', type=argparse.FileType('r'))
-args = parser.parse_args()
-
-points = pandas.read_csv(args.file, header=None)
-
-print("WitnessComplex with number_of_landmarks=100")
-
-witness_complex = gudhi.WitnessComplex(points=points.values,
- number_of_landmarks=100)
-
-witness_complex.initialize_filtration()
-
-print("filtered_tree=", witness_complex.get_filtered_tree())