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Diffstat (limited to 'src/cython/include/Persistence_heat_maps_interface.h')
| -rw-r--r-- | src/cython/include/Persistence_heat_maps_interface.h | 156 |
1 files changed, 0 insertions, 156 deletions
diff --git a/src/cython/include/Persistence_heat_maps_interface.h b/src/cython/include/Persistence_heat_maps_interface.h deleted file mode 100644 index fe565313..00000000 --- a/src/cython/include/Persistence_heat_maps_interface.h +++ /dev/null @@ -1,156 +0,0 @@ -/* This file is part of the Gudhi Library. The Gudhi library - * (Geometric Understanding in Higher Dimensions) is a generic C++ - * library for computational topology. - * - * Author(s): Pawel Dlotko - * - * Copyright (C) 2016 INRIA (France) - * - * This program is free software: you can redistribute it and/or modify - * it under the terms of the GNU General Public License as published by - * the Free Software Foundation, either version 3 of the License, or - * (at your option) any later version. - * - * This program is distributed in the hope that it will be useful, - * but WITHOUT ANY WARRANTY; without even the implied warranty of - * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the - * GNU General Public License for more details. - * - * You should have received a copy of the GNU General Public License - * along with this program. If not, see <http://www.gnu.org/licenses/>. - */ - -#ifndef PERSISTENCE_HEAT_MAPS_INTERFACE_H_ -#define PERSISTENCE_HEAT_MAPS_INTERFACE_H_ - -// gudhi include -#include <gudhi/read_persistence_from_file.h> -#include <gudhi/common_persistence_representations.h> - -// standard include -#include <vector> -#include <sstream> -#include <iostream> -#include <cmath> -#include <limits> -#include <algorithm> -#include <utility> -#include <string> -#include <functional> - -namespace Gudhi { -namespace Persistence_representations { - -class Persistence_heat_maps_interface : public Persistence_heat_maps { - public: - - Persistence_heat_maps_interface():Persistence_heat_maps(){} - - - Persistence_heat_maps_interface(const std::vector<std::pair<double, double> >& interval, - std::vector<std::vector<double> > filter = create_Gaussian_filter(5, 1), - bool erase_below_diagonal = false, size_t number_of_pixels = 1000, - double min_ = std::numeric_limits<double>::max(), - double max_ = std::numeric_limits<double>::max()): - Persistence_heat_maps(interval,filter,erase_below_diagonal,number_of_pixels,min_max_){} - - - Persistence_heat_maps_interface(const char* filename, std::vector<std::vector<double> > filter = create_Gaussian_filter(5, 1), - bool erase_below_diagonal = false, size_t number_of_pixels = 1000, - double min_ = std::numeric_limits<double>::max(), - double max_ = std::numeric_limits<double>::max(), - unsigned dimension = std::numeric_limits<unsigned>::max()): - Persistence_heat_maps(filename,filter,erase_below_diagonal,number_of_pixels,min_,max_,dimension){} - - void compute_mean_interface(const std::vector<Persistence_heat_maps*>& maps) - { - this->compute_mean(maps); - } - - void compute_median_interface(const std::vector<Persistence_heat_maps*>& maps) - { - this->compute_median(maps); - } - - void compute_percentage_of_active_interface(const std::vector<Persistence_heat_maps*>& maps, size_t cutoff = 1) - { - this->compute_percentage_of_active(maps,cutoff); - } - - void print_to_file_interface(const char* filename) const - { - this->print_to_file(filename); - } - - void load_from_file_interface(const char* filename) - { - this->load_from_file( filename ); - } - - inline bool check_if_the_same_interface(const Persistence_heat_maps& second) const - { - return this->check_if_the_same( second ); - } - - inline double get_min_interface() const - { - return this->get_min(); - } - - inline double get_max_interface() const - { - return this->get_max(); - } - - std::vector<double> vectorize_interface(int number_of_function) const - { - return this->vectorize(number_of_function); - } - - size_t number_of_vectorize_functions_interface() const - { - return this->number_of_vectorize_functions(); - } - - double project_to_R_interface(int number_of_function) const - { - return this->project_to_R( number_of_function ); - } - - size_t number_of_projections_to_R_interface() const - { - return this->number_of_projections_to_R(); - } - - double distance_interface(const Persistence_heat_maps& second_, double power = 1) const - { - return this->distance( second, power ); - } - - void compute_average_interface(const std::vector<Persistence_heat_maps*>& to_average) - { - this->compute_average( to_average ); - } - - double compute_scalar_product_interface(const Persistence_heat_maps& second_) const - { - return this->compute_scalar_product( second_ ); - } - - std::pair<double, double> get_x_range_interface() const - { - return this->get_x_range(); - } - - std::pair<double, double> get_y_range_interface() const - { - return this->get_y_range(); - } - -}; - - -} // namespace Persistence_representations -} // namespace Gudhi - -#endif // PERSISTENCE_HEAT_MAPS_INTERFACE_H_ |