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+cmake_minimum_required(VERSION 2.8)
+project(Cython)
+
+function( add_gudhi_cython_lib THE_LIB )
+ if(EXISTS ${THE_LIB})
+ get_filename_component(THE_LIB_FILE_NAME ${THE_LIB} NAME_WE)
+ if(WIN32)
+ message("++ ${THE_LIB} => THE_LIB_FILE_NAME = ${THE_LIB_FILE_NAME}")
+ set(GUDHI_CYTHON_LIBRARIES "${GUDHI_CYTHON_LIBRARIES}'${THE_LIB_FILE_NAME}', " PARENT_SCOPE)
+ else(WIN32)
+ STRING(REGEX REPLACE "lib" "" UNIX_LIB_FILE_NAME ${THE_LIB_FILE_NAME})
+ message("++ ${THE_LIB} => UNIX_LIB_FILE_NAME = ${UNIX_LIB_FILE_NAME}")
+ set(GUDHI_CYTHON_LIBRARIES "${GUDHI_CYTHON_LIBRARIES}'${UNIX_LIB_FILE_NAME}', " PARENT_SCOPE)
+ endif(WIN32)
+ endif(EXISTS ${THE_LIB})
+endfunction( add_gudhi_cython_lib )
+
+# THE_TEST is the python test file name (without .py extension) containing tests functions
+function( add_gudhi_py_test THE_TEST )
+ # use ${PYTHON_EXECUTABLE} -B, otherwise a __pycache__ directory is created in sources by python
+ # use py.test no cache provider, otherwise a .cache file is created in sources by py.test
+ add_test(NAME ${THE_TEST}_py_test
+ WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
+ COMMAND ${PYTHON_EXECUTABLE} -B -m pytest -p no:cacheprovider ${CMAKE_CURRENT_SOURCE_DIR}/test/${THE_TEST}.py)
+endfunction( add_gudhi_py_test )
+
+
+if(CYTHON_FOUND)
+ message("++ ${PYTHON_EXECUTABLE} v.${PYTHON_VERSION_STRING} - Cython is ${CYTHON_EXECUTABLE} - Sphinx is ${SPHINX_PATH}")
+
+ set(GUDHI_CYTHON_EXTRA_COMPILE_ARGS "${GUDHI_CYTHON_EXTRA_COMPILE_ARGS}'-DBOOST_RESULT_OF_USE_DECLTYPE', ")
+ set(GUDHI_CYTHON_EXTRA_COMPILE_ARGS "${GUDHI_CYTHON_EXTRA_COMPILE_ARGS}'-DBOOST_ALL_NO_LIB', ")
+ set(GUDHI_CYTHON_EXTRA_COMPILE_ARGS "${GUDHI_CYTHON_EXTRA_COMPILE_ARGS}'-DBOOST_SYSTEM_NO_DEPRECATED', ")
+
+ # This is because of https://github.com/CGAL/cgal/blob/master/Installation/include/CGAL/tss.h
+ # CGAL is using boost thread if thread_local is not ready (requires XCode 8 for Mac).
+ # The test in https://github.com/CGAL/cgal/blob/master/Installation/include/CGAL/config.h
+ # #if __has_feature(cxx_thread_local) || \
+ # ( (__GNUC__ * 100 + __GNUC_MINOR__) >= 408 && __cplusplus >= 201103L ) || \
+ # ( _MSC_VER >= 1900 )
+ # #define CGAL_CAN_USE_CXX11_THREAD_LOCAL
+ # #endif
+ set(CGAL_CAN_USE_CXX11_THREAD_LOCAL "
+ int main() {
+ #ifndef __has_feature
+ #define __has_feature(x) 0 // Compatibility with non-clang compilers.
+ #endif
+ #if __has_feature(cxx_thread_local) || \
+ ( (__GNUC__ * 100 + __GNUC_MINOR__) >= 408 && __cplusplus >= 201103L ) || \
+ ( _MSC_VER >= 1900 )
+ bool has_feature_thread_local = true;
+ #else
+ // Explicit error of compilation for CMake test purpose - has_feature_thread_local is not defined
+ #endif
+ bool result = has_feature_thread_local;
+ } ")
+ check_cxx_source_compiles("${CGAL_CAN_USE_CXX11_THREAD_LOCAL}" CGAL_CAN_USE_CXX11_THREAD_LOCAL_RESULT)
+
+ if (NOT CGAL_CAN_USE_CXX11_THREAD_LOCAL_RESULT)
+ add_gudhi_cython_lib(${Boost_THREAD_LIBRARY})
+ set(GUDHI_CYTHON_LIBRARY_DIRS "${GUDHI_CYTHON_LIBRARY_DIRS}'${Boost_LIBRARY_DIRS}', ")
+ endif()
+
+ # Gudhi and CGAL compilation option
+ if(MSVC)
+ set(GUDHI_CYTHON_EXTRA_COMPILE_ARGS "${GUDHI_CYTHON_EXTRA_COMPILE_ARGS}'/fp:strict', ")
+ else(MSVC)
+ set(GUDHI_CYTHON_EXTRA_COMPILE_ARGS "${GUDHI_CYTHON_EXTRA_COMPILE_ARGS}'-std=c++11', ")
+ endif(MSVC)
+ if(CMAKE_COMPILER_IS_GNUCXX)
+ set(GUDHI_CYTHON_EXTRA_COMPILE_ARGS "${GUDHI_CYTHON_EXTRA_COMPILE_ARGS}'-frounding-math', ")
+ endif(CMAKE_COMPILER_IS_GNUCXX)
+ if (CMAKE_CXX_COMPILER_ID MATCHES Intel)
+ set(GUDHI_CYTHON_EXTRA_COMPILE_ARGS "${GUDHI_CYTHON_EXTRA_COMPILE_ARGS}'-fp-model strict', ")
+ endif(CMAKE_CXX_COMPILER_ID MATCHES Intel)
+ if (DEBUG_TRACES)
+ # For programs to be more verbose
+ set(GUDHI_CYTHON_EXTRA_COMPILE_ARGS "${GUDHI_CYTHON_EXTRA_COMPILE_ARGS}'-DDEBUG_TRACES', ")
+ endif()
+
+ if (EIGEN3_FOUND)
+ # No problem, even if no CGAL found
+ set(GUDHI_CYTHON_EXTRA_COMPILE_ARGS "${GUDHI_CYTHON_EXTRA_COMPILE_ARGS}'-DCGAL_EIGEN3_ENABLED', ")
+ endif (EIGEN3_FOUND)
+
+ if (NOT CGAL_VERSION VERSION_LESS 4.8.1)
+ set(GUDHI_CYTHON_BOTTLENECK_DISTANCE "include '${CMAKE_CURRENT_SOURCE_DIR}/cython/bottleneck_distance.pyx'")
+ endif (NOT CGAL_VERSION VERSION_LESS 4.8.1)
+ if (NOT CGAL_WITH_EIGEN3_VERSION VERSION_LESS 4.8.1)
+ set(GUDHI_CYTHON_SUBSAMPLING "include '${CMAKE_CURRENT_SOURCE_DIR}/cython/subsampling.pyx'")
+ set(GUDHI_CYTHON_TANGENTIAL_COMPLEX "include '${CMAKE_CURRENT_SOURCE_DIR}/cython/tangential_complex.pyx'")
+ endif (NOT CGAL_WITH_EIGEN3_VERSION VERSION_LESS 4.8.1)
+ if (NOT CGAL_WITH_EIGEN3_VERSION VERSION_LESS 4.7.0)
+ set(GUDHI_CYTHON_ALPHA_COMPLEX "include '${CMAKE_CURRENT_SOURCE_DIR}/cython/alpha_complex.pyx'")
+ endif (NOT CGAL_WITH_EIGEN3_VERSION VERSION_LESS 4.7.0)
+ if (NOT CGAL_WITH_EIGEN3_VERSION VERSION_LESS 4.6.0)
+ set(GUDHI_CYTHON_EUCLIDEAN_WITNESS_COMPLEX
+ "include '${CMAKE_CURRENT_SOURCE_DIR}/cython/euclidean_witness_complex.pyx'\ninclude '${CMAKE_CURRENT_SOURCE_DIR}/cython/euclidean_strong_witness_complex.pyx'\n")
+ endif (NOT CGAL_WITH_EIGEN3_VERSION VERSION_LESS 4.6.0)
+
+ if(CGAL_FOUND)
+ # Add CGAL compilation args
+ if(CGAL_HEADER_ONLY)
+ set(GUDHI_CYTHON_EXTRA_COMPILE_ARGS "${GUDHI_CYTHON_EXTRA_COMPILE_ARGS}'-DCGAL_HEADER_ONLY', ")
+ else(CGAL_HEADER_ONLY)
+ add_gudhi_cython_lib(${CGAL_LIBRARIES})
+ set(GUDHI_CYTHON_LIBRARY_DIRS "${GUDHI_CYTHON_LIBRARY_DIRS}'${CGAL_LIBRARIES_DIR}', ")
+ # If CGAL is not header only, CGAL library may link with boost system,
+ add_gudhi_cython_lib(${Boost_SYSTEM_LIBRARY})
+ set(GUDHI_CYTHON_LIBRARY_DIRS "${GUDHI_CYTHON_LIBRARY_DIRS}'${Boost_LIBRARY_DIRS}', ")
+ endif(CGAL_HEADER_ONLY)
+ # GMP and GMPXX are not required, but if present, CGAL will link with them.
+ if(GMP_FOUND)
+ set(GUDHI_CYTHON_EXTRA_COMPILE_ARGS "${GUDHI_CYTHON_EXTRA_COMPILE_ARGS}'-DCGAL_USE_GMP', ")
+ add_gudhi_cython_lib(${GMP_LIBRARIES})
+ set(GUDHI_CYTHON_LIBRARY_DIRS "${GUDHI_CYTHON_LIBRARY_DIRS}'${GMP_LIBRARIES_DIR}', ")
+ if(GMPXX_FOUND)
+ set(GUDHI_CYTHON_EXTRA_COMPILE_ARGS "${GUDHI_CYTHON_EXTRA_COMPILE_ARGS}'-DCGAL_USE_GMPXX', ")
+ add_gudhi_cython_lib(${GMPXX_LIBRARIES})
+ set(GUDHI_CYTHON_LIBRARY_DIRS "${GUDHI_CYTHON_LIBRARY_DIRS}'${GMPXX_LIBRARIES_DIR}', ")
+ endif(GMPXX_FOUND)
+ endif(GMP_FOUND)
+ endif(CGAL_FOUND)
+
+ # Specific for Mac
+ if (${CMAKE_SYSTEM_NAME} MATCHES "Darwin")
+ set(GUDHI_CYTHON_EXTRA_COMPILE_ARGS "${GUDHI_CYTHON_EXTRA_COMPILE_ARGS}'-mmacosx-version-min=10.12', ")
+ set(GUDHI_CYTHON_EXTRA_LINK_ARGS "${GUDHI_CYTHON_EXTRA_LINK_ARGS}'-mmacosx-version-min=10.12', ")
+ endif(${CMAKE_SYSTEM_NAME} MATCHES "Darwin")
+
+ # Loop on INCLUDE_DIRECTORIES PROPERTY
+ get_property(GUDHI_INCLUDE_DIRECTORIES DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} PROPERTY INCLUDE_DIRECTORIES)
+ foreach(GUDHI_INCLUDE_DIRECTORY ${GUDHI_INCLUDE_DIRECTORIES})
+ set(GUDHI_CYTHON_INCLUDE_DIRS "${GUDHI_CYTHON_INCLUDE_DIRS}'${GUDHI_INCLUDE_DIRECTORY}', ")
+ endforeach()
+ set(GUDHI_CYTHON_INCLUDE_DIRS "${GUDHI_CYTHON_INCLUDE_DIRS}'${CMAKE_SOURCE_DIR}/${GUDHI_CYTHON_PATH}/include', ")
+
+ if (TBB_FOUND)
+ set(GUDHI_CYTHON_EXTRA_COMPILE_ARGS "${GUDHI_CYTHON_EXTRA_COMPILE_ARGS}'-DGUDHI_USE_TBB', ")
+ add_gudhi_cython_lib(${TBB_RELEASE_LIBRARY})
+ add_gudhi_cython_lib(${TBB_MALLOC_RELEASE_LIBRARY})
+ set(GUDHI_CYTHON_LIBRARY_DIRS "${GUDHI_CYTHON_LIBRARY_DIRS}'${TBB_LIBRARY_DIRS}', ")
+ set(GUDHI_CYTHON_INCLUDE_DIRS "${GUDHI_CYTHON_INCLUDE_DIRS}'${TBB_INCLUDE_DIRS}', ")
+ endif()
+
+ if(UNIX)
+ set( GUDHI_CYTHON_RUNTIME_LIBRARY_DIRS "${GUDHI_CYTHON_LIBRARY_DIRS}")
+ endif(UNIX)
+
+ # Generate setup.py file to cythonize Gudhi - This file must be named setup.py by convention
+ configure_file(setup.py.in "${CMAKE_CURRENT_BINARY_DIR}/setup.py" @ONLY)
+ # Generate gudhi.pyx - Gudhi cython file
+ configure_file(gudhi.pyx.in "${CMAKE_CURRENT_BINARY_DIR}/gudhi.pyx" @ONLY)
+
+ add_custom_command(
+ OUTPUT gudhi.so
+ WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
+ COMMAND ${PYTHON_EXECUTABLE} "${CMAKE_CURRENT_BINARY_DIR}/setup.py" "build_ext" "--inplace")
+
+ add_custom_target(cython ALL DEPENDS gudhi.so
+ COMMENT "Do not forget to add ${CMAKE_CURRENT_BINARY_DIR}/ to your PYTHONPATH before using examples or tests")
+
+ # For installation purpose
+ # TODO(VR) : files matching pattern mechanism is copying all cython directory
+ install(DIRECTORY "${CMAKE_CURRENT_BINARY_DIR}" DESTINATION "${PYTHON_SITE_PACKAGES}/" FILES_MATCHING
+ PATTERN "*.so"
+ PATTERN "*.dylib"
+ PATTERN "*.pyd")
+
+ # Test examples
+ if (NOT CGAL_WITH_EIGEN3_VERSION VERSION_LESS 4.8.1)
+ # Bottleneck and Alpha
+ add_test(NAME alpha_rips_persistence_bottleneck_distance_py_test
+ WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
+ COMMAND ${CMAKE_COMMAND} -E env "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}"
+ ${PYTHON_EXECUTABLE} "${CMAKE_CURRENT_SOURCE_DIR}/example/alpha_rips_persistence_bottleneck_distance.py"
+ -f ${CMAKE_SOURCE_DIR}/data/points/tore3D_300.off -t 0.15 -d 3)
+
+ # Tangential
+ add_test(NAME tangential_complex_plain_homology_from_off_file_example_py_test
+ WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
+ COMMAND ${CMAKE_COMMAND} -E env "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}"
+ ${PYTHON_EXECUTABLE} "${CMAKE_CURRENT_SOURCE_DIR}/example/tangential_complex_plain_homology_from_off_file_example.py"
+ --no-diagram -f ${CMAKE_SOURCE_DIR}/data/points/tore3D_300.off)
+
+ add_gudhi_py_test(test_tangential_complex)
+
+ # Witness complex AND Subsampling
+ add_test(NAME euclidean_strong_witness_complex_diagram_persistence_from_off_file_example_py_test
+ WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
+ COMMAND ${CMAKE_COMMAND} -E env "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}"
+ ${PYTHON_EXECUTABLE} "${CMAKE_CURRENT_SOURCE_DIR}/example/euclidean_strong_witness_complex_diagram_persistence_from_off_file_example.py"
+ --no-diagram -f ${CMAKE_SOURCE_DIR}/data/points/tore3D_300.off -a 1.0 -n 20 -d 2)
+
+ add_test(NAME euclidean_witness_complex_diagram_persistence_from_off_file_example_py_test
+ WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
+ COMMAND ${CMAKE_COMMAND} -E env "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}"
+ ${PYTHON_EXECUTABLE} "${CMAKE_CURRENT_SOURCE_DIR}/example/euclidean_witness_complex_diagram_persistence_from_off_file_example.py"
+ --no-diagram -f ${CMAKE_SOURCE_DIR}/data/points/tore3D_300.off -a 1.0 -n 20 -d 2)
+
+ # Subsampling
+ add_gudhi_py_test(test_subsampling)
+
+ endif (NOT CGAL_WITH_EIGEN3_VERSION VERSION_LESS 4.8.1)
+ if (NOT CGAL_VERSION VERSION_LESS 4.8.1)
+ # Bottleneck
+ add_test(NAME bottleneck_basic_example_py_test
+ WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
+ COMMAND ${CMAKE_COMMAND} -E env "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}"
+ ${PYTHON_EXECUTABLE} "${CMAKE_CURRENT_SOURCE_DIR}/example/bottleneck_basic_example.py")
+
+ add_gudhi_py_test(test_bottleneck_distance)
+ endif (NOT CGAL_VERSION VERSION_LESS 4.8.1)
+
+ if (NOT CGAL_WITH_EIGEN3_VERSION VERSION_LESS 4.7.0)
+ # Alpha
+ add_test(NAME alpha_complex_from_points_example_py_test
+ WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
+ COMMAND ${CMAKE_COMMAND} -E env "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}"
+ ${PYTHON_EXECUTABLE} "${CMAKE_CURRENT_SOURCE_DIR}/example/alpha_complex_from_points_example.py")
+
+ add_test(NAME alpha_complex_diagram_persistence_from_off_file_example_py_test
+ WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
+ COMMAND ${CMAKE_COMMAND} -E env "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}"
+ ${PYTHON_EXECUTABLE} "${CMAKE_CURRENT_SOURCE_DIR}/example/alpha_complex_diagram_persistence_from_off_file_example.py"
+ --no-diagram -f ${CMAKE_SOURCE_DIR}/data/points/tore3D_300.off -a 0.6)
+
+ add_gudhi_py_test(test_alpha_complex)
+
+ endif (NOT CGAL_WITH_EIGEN3_VERSION VERSION_LESS 4.7.0)
+
+ if (NOT CGAL_WITH_EIGEN3_VERSION VERSION_LESS 4.6.0)
+ # Euclidean witness
+ add_gudhi_py_test(test_euclidean_witness_complex)
+
+ endif (NOT CGAL_WITH_EIGEN3_VERSION VERSION_LESS 4.6.0)
+
+ # Cubical
+ add_test(NAME periodic_cubical_complex_barcode_persistence_from_perseus_file_example_py_test
+ WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
+ COMMAND ${CMAKE_COMMAND} -E env "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}"
+ ${PYTHON_EXECUTABLE} "${CMAKE_CURRENT_SOURCE_DIR}/example/periodic_cubical_complex_barcode_persistence_from_perseus_file_example.py"
+ --no-barcode -f ${CMAKE_SOURCE_DIR}/data/bitmap/CubicalTwoSphere.txt)
+
+ add_test(NAME random_cubical_complex_persistence_example_py_test
+ WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
+ COMMAND ${CMAKE_COMMAND} -E env "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}"
+ ${PYTHON_EXECUTABLE} "${CMAKE_CURRENT_SOURCE_DIR}/example/random_cubical_complex_persistence_example.py"
+ 10 10 10)
+
+ add_gudhi_py_test(test_cubical_complex)
+
+ # Rips
+ add_test(NAME rips_complex_diagram_persistence_from_distance_matrix_file_example_py_test
+ WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
+ COMMAND ${CMAKE_COMMAND} -E env "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}"
+ ${PYTHON_EXECUTABLE} "${CMAKE_CURRENT_SOURCE_DIR}/example/rips_complex_diagram_persistence_from_distance_matrix_file_example.py"
+ --no-diagram -f ${CMAKE_SOURCE_DIR}/data/distance_matrix/lower_triangular_distance_matrix.csv -e 12.0 -d 3)
+
+ add_test(NAME rips_complex_diagram_persistence_from_off_file_example_py_test
+ WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
+ COMMAND ${CMAKE_COMMAND} -E env "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}"
+ ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/example/rips_complex_diagram_persistence_from_off_file_example.py
+ --no-diagram -f ${CMAKE_SOURCE_DIR}/data/points/tore3D_300.off -e 0.25 -d 3)
+
+ add_test(NAME rips_complex_from_points_example_py_test
+ WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
+ COMMAND ${CMAKE_COMMAND} -E env "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}"
+ ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/example/rips_complex_from_points_example.py)
+
+ add_gudhi_py_test(test_rips_complex)
+
+ # Simplex tree
+ add_test(NAME simplex_tree_example_py_test
+ WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
+ COMMAND ${CMAKE_COMMAND} -E env "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}"
+ ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/example/simplex_tree_example.py)
+
+ add_gudhi_py_test(test_simplex_tree)
+
+ # Witness
+ add_test(NAME witness_complex_from_nearest_landmark_table_py_test
+ WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
+ COMMAND ${CMAKE_COMMAND} -E env "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}"
+ ${PYTHON_EXECUTABLE} ${CMAKE_CURRENT_SOURCE_DIR}/example/witness_complex_from_nearest_landmark_table.py)
+
+ add_gudhi_py_test(test_witness_complex)
+
+ # Reader utils
+ add_gudhi_py_test(test_reader_utils)
+
+ # Documentation generation is available through sphinx - requires all modules
+ if(SPHINX_PATH AND NOT CGAL_WITH_EIGEN3_VERSION VERSION_LESS 4.8.1)
+ set (GUDHI_SPHINX_MESSAGE "Generating API documentation with Sphinx in ${CMAKE_CURRENT_BINARY_DIR}/sphinx/")
+ # User warning - Sphinx is a static pages generator, and configured to work fine with user_version
+ # Images and biblio warnings because not found on developper version
+ if (GUDHI_CYTHON_PATH STREQUAL "src/cython")
+ set (GUDHI_SPHINX_MESSAGE "${GUDHI_SPHINX_MESSAGE} \n WARNING : Sphinx is configured for user version, you run it on developper version. Images and biblio will miss")
+ endif()
+ # sphinx target requires gudhi.so, because conf.py reads gudhi version from it
+ add_custom_target(sphinx
+ WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR}/doc
+ COMMAND ${CMAKE_COMMAND} -E env "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}"
+ ${SPHINX_PATH} -b html ${CMAKE_CURRENT_SOURCE_DIR}/doc ${CMAKE_CURRENT_BINARY_DIR}/sphinx
+ DEPENDS "${CMAKE_CURRENT_BINARY_DIR}/gudhi.so"
+ COMMENT "${GUDHI_SPHINX_MESSAGE}" VERBATIM)
+
+ add_test(NAME sphinx_py_test
+ WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
+ COMMAND ${CMAKE_COMMAND} -E env "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}"
+ ${SPHINX_PATH} -b doctest ${CMAKE_CURRENT_SOURCE_DIR}/doc ${CMAKE_CURRENT_BINARY_DIR}/doctest)
+
+ endif(SPHINX_PATH AND NOT CGAL_WITH_EIGEN3_VERSION VERSION_LESS 4.8.1)
+endif(CYTHON_FOUND)