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2016-12-15small modificationsfgodi
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/bottleneck_integration@1882 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 11247904405f3da37514e5cc4848c6971edb4254
2016-12-15Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/subsampling_and_spatialsearching@1881 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 597eb5b036e3e1d7e10fa0aac135cfc49c031962
2016-12-15Merge tangential_test branch to fix tangential bugvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1879 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: f05e229a7b076c8c98b59e36b6be46f03fefbc80
2016-12-15Remove unused modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tangential_test@1878 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1b3dafad298e0caa87825ce47f6e8ac3983206a0
2016-12-15namespacefgodi
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/bottleneck_integration@1877 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0d15f01525272ec8bea7436fa18dbac213becf0a
2016-12-15Fix max issue on Windowsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tangential_test@1876 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 957e2196a4a56308f76c0f55d182ffd3952eaf4e
2016-12-15Remove example.cppvrouvrea
Remove tangent traces in Tangential_complex.h Modify test_tangential_complex.cpp to make UT work git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tangential_test@1875 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1bd09671ca6f30c66cce7b48b382e1a8e4fbd3b5
2016-12-14Added an example with a distance matrix for the farthest point algorithmskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/subsampling_and_spatialsearching@1874 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 340e465189dc7ec8f8706e60e2d8097b53bfd5a0
2016-12-14Bug fix for degenerate casescjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tangential_test@1873 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a292246c5e85275ec8bbf293fa0157d6693121cf
2016-12-14Points perturbvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tangential_test@1872 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: f194dac5b999169fdf29fbb9223f0ee9db9c12ba
2016-12-14Add tracesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tangential_test@1871 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: b37d7be6b0f2ecc5217180e7ce3b14ab338c2354
2016-12-14example modifvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tangential_test@1870 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 43cf0d0b91808445614a3dc3d51ee87679c1a5d1
2016-12-14Improved the documentation for choose_farthest_pointsskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/subsampling_and_spatialsearching@1869 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 08223b7d1788c73b0fb3fc7255a6386896b63626
2016-12-14Rollback pointer modification, and use of of a hack for no deep copy of ↵vrouvrea
boost graph "voidification" of create_complex method git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1868 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 3667c8f57388dec0300d1fed8bf1b063843727dd
2016-12-14Merged trunc to branchskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/subsampling_and_spatialsearching@1867 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 20d5120a0702522b632008bfc6a5257c70c849d1
2016-12-13Use of a pointer for the rips skeleton graph member variable to avoid deep ↵vrouvrea
copy of the structure. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1865 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fe745c7c61d9149689521c1cb9e750b2682179b5
2016-12-13example point displayvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tangential_test@1864 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1a97b8a9c1f7aff6cdeae8a2fa0eef911f4a5596
2016-12-13Example modificationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tangential_test@1863 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0706eed9656c214bbabfa9a8da2f800c2afdf140
2016-12-13Add example just for Mac test. To be removed.vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tangential_test@1861 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: be598143de42dba782462985515cbc77b0a51e8b
2016-12-12Fix for doc reviewvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1859 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 3460f25024dc952a3313322111ffb1b3eef5abda
2016-12-12Doc changed for reviewvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1858 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2b70b619233362adebdc3046c923090fac53a660
2016-12-12Doc fix from reviewvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1857 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 88619abff993bd776310f18034d2ab5fa0b41944
2016-12-12rename simplex_tree variable namesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1856 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: aa283b26d5c31577698dcec271e7b0ef95b4bd0f
2016-12-12Remove comment // to construct a simplex_tree from rips complexvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1855 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2be10c7952457b0f6210c4bbbce82eaa250498a7
2016-12-12parenthesis for std::min because of Windows min global functionvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tangential_test@1854 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 4540b7f111515cbe8e9e53c78fc00111533306f1
2016-12-12Use (std::numeric_limits<std::size_t>::max) to fix Windows global min maxvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tangential_test@1853 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 970c2190f89a6f11712edc07c1980ce0cbdb486b
2016-12-12Fix max issue and remove (&tr == NULL) testvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tangential_test@1852 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 932aa53773092c64f1d69ce0d4c0fdaf817b5b06
2016-12-12Fix euclidean_distance in accordance with peer reviewvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1851 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 998c4f281a90842d598f3fe840a8526865ff9830
2016-12-12Fix the bug, remove tan_test from examples and add a unitary testvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tangential_test@1850 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 852570382d6f5713e534b49e7abf1e96a4a84076
2016-12-12Merge from trunk.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/qt5@1848 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c8e1376894207c8c08896f750f71c115e07f6d95
2016-12-12Boost bug https://svn.boost.org/trac/boost/ticket/12534glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1847 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 063ad9bf7bcf1163dc4935f8bdd93d6ea334609f
2016-12-08replace euclidean_distance with a class Euclidean_distance containing an ↵vrouvrea
operator() git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1840 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: b1619401ac0ef978257709c5deeb7e19fbcff32c
2016-12-08Remove inline from read_graph (now inline)vrouvrea
Remove Edge_t template (not needed) Add documentation on template params git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1839 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a011b11cddf1a20e29743e6b170dac054ac79c12
2016-12-06small modificationfgodi
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/bottleneck_integration@1829 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c4eeb9f4b467bdf23c8cd02b5aeac68170c9bcf9
2016-12-06infinite points separately computedfgodi
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/bottleneck_integration@1828 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5d1cd63a1b8ff26feffce86a4febe2f42d52340d
2016-12-05review prise en comptefgodi
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/bottleneck_integration@1821 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 4c24c2bebc49c70d0502ffdb1f23e451d17a3b88
2016-12-03sparsify point set cythonizationvrouvrea
unitary tested git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ST_cythonize@1816 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 170f14ffcf009ebe1169df90a4e088441eaad13f
2016-12-02Indicate ambient dimcjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1815 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a6fb388505a43878c7a31592f5ccc4b29fda12a6
2016-12-02pick_n_random_points cythonizationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ST_cythonize@1814 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 696c9b39cb05e69e2d9c2a3ac3f5400c7e518691
2016-12-02Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tangential_test@1812 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2d39f5e9b1dc30044dbb90222296bf2d88a99f82
2016-12-02Re-indent CGAL templates for readibilityvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1811 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 40a44ba88beead6e8a2aba73d8975216b4710677
2016-12-01Merge last trunk modificationsvrouvrea
add Py test for subsampling Add choose_n_furthest from off file git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ST_cythonize@1810 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a23746a3dd427edc958b375f9f0ac4b4d2901fcb
2016-12-01Add Subsampling cpp interface and cythonvrouvrea
Remove deref cyton import git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ST_cythonize@1809 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2dc0469d2401e0c99e879c064a0f608c8ba78ed6
2016-12-01Remove traces from tangentialvrouvrea
Tests the limits for choose_n_farthest_points and fix random git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1808 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 53eec1efbc138080d1b202c2cdd4e7ff8cdde266
2016-11-30Add tan_test for test purposevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tangential_test@1807 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 85200e0b013cc119aead9556e97db877b3421064
2016-11-30Branch to test tangentialvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tangential_test@1806 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 962f4732cfa535bc4e749027ebe426c6033dbf15
2016-11-30Doc, examples and tests updates for tangentialvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ST_cythonize@1805 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 56d080f79a7a0c3b6eb3ed38b376e899cb17c8f9
2016-11-29Fix interface for Alpha complex and Tangential complexvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ST_cythonize@1801 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 995b53c7f65057ec155988b90f17299665eab4ae
2016-11-29better gestion of infinite pointsfgodi
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/bottleneck_integration@1798 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 28cca4bf35541a677fe08d5f0a8b89dfe9017962
2016-11-29basic example, infinityfgodi
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/bottleneck_integration@1797 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 23432677e7f1628dda596e9ba31138fc5063a608
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