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2017-12-14Add cmake improvement for Persistence representation module.vrouvrea
Was bad tested and too hard to maintain git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/persistence_representation_integration_cmake_improvement@3071 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fa4684701edbe6d172e75f119afa912eb3b5dad7
2017-12-09CMake modification strategy as it was quite painful to maintain all these ↵vrouvrea
utilities git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/persistence_representation_integration_cmake_improvement@3062 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c0eae764abe5c7076ae59027eeab2a7ad451463c
2017-12-09A branch to improve CMake for persistence representationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/persistence_representation_integration_cmake_improvement@3061 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2cd629081bfa76b4da2696245e433a0ae0ee11b4
2017-12-08File formats for iso cuboid and perseus in the Python versionvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3057 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 6eb0a025d8549320e03727ce491563b2a941c82d
2017-12-06Fix precision error bugvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3047 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: f1fb36cb9f658b53aaa5844c24eef404556003fd
2017-12-06Add traces for debugvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3046 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d9319e590a5e2acdec0c1bce0698ac32aeb857a2
2017-12-06Merge C++ version of persistence representationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3044 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c7d5d0f584b74dc0dd919e375d170e1998a9744f
2017-12-06Merge C++ version of persistence representationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/persistence_representation_integration_bis@3043 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 6421c7cbe670fad1a8900ccc0ea6ff32297dd5e7
2017-12-06A branch for C++ persistence representation integrationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/persistence_representation_integration_bis@3042 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 349bfb52cad23bab3ec03b025aedb4080630ceea
2017-12-06Merge add_utils_in_gudhi_v2 branch after 2nd round of reviewvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3041 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ad134cc2b6756e20afc8d9db9e40c5af87d09f9d
2017-12-06Fix cpplintvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3040 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 69ddae02dd1005b5ded5d4e0127a9eaa7081f5d6
2017-12-05Code review fix and std::size_tvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3039 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2ef03e413290c9f5ae0396a613b963d64e827a07
2017-12-05After fix code reviewvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3038 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 07971bb9211bdfd340c0525c12610bbcf3897951
2017-12-05Fix Perseus read file failed casesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3032 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 397a6316814d3214b0f39ab1249b48100fb995ee
2017-12-01Fix cubical periodic cythonizationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3004 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 664770dcae1726b94d4a486c376d1d2f744371eb
2017-11-24Merge ST-doc-simplex branchvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@2953 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 6a2e9879d7374ce337b2be7a445d8f4adce1f332
2017-11-24Update linkcjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/add_utils_in_gudhi_v2@2952 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 72ac475a06eeb1752e747f2ca8f7c5ae20389cc3
2017-11-24Typoscjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/add_utils_in_gudhi_v2@2951 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 87f3b4861218ca91630bba3a83038325636f6dc9
2017-11-24Describe CSV matrix filecjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/add_utils_in_gudhi_v2@2950 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: bfad995548f0336c38da0de9c04f5eeaafd67570
2017-11-24Move Perseus file format to file_formats.hcjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/add_utils_in_gudhi_v2@2949 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: e2f0dcf1efdc3c26ff609b7a14d37a604a9c162f
2017-11-24Add linkcjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/add_utils_in_gudhi_v2@2948 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: e41794c0552552f14afe81ead6df3530f02bd388
2017-11-22Add precisionscjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/add_utils_in_gudhi_v2@2944 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7017c186aaad9702b72886348e5bfefa5a17160f
2017-11-22b => birth + d => deathcjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/add_utils_in_gudhi_v2@2943 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 6ec0292942fcc14c1ef53b8ff9d1182b8f07a287
2017-11-22Rename some utilities + some fix in the doccjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/add_utils_in_gudhi_v2@2942 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: e7fe4af0f7d54ed580e557fe7ff9bc57ced2baa9
2017-11-22Add link to OFF file doccjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/add_utils_in_gudhi_v2@2941 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2789c8353a525f9a0bfa1d51886b5d2388daf469
2017-11-22Fix typocjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/add_utils_in_gudhi_v2@2940 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: b888519a9985ae84fcf5788eab66fc5b574936f8
2017-11-22Part of the doc disappeared during the homogenization...cjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/add_utils_in_gudhi_v2@2939 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1381b0362d36dbd1ed67c180f5488b05f4784624
2017-11-22Merge set_dimension_mechanism_precision branchvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@2936 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: b308c3c49a541175f4c70e7e28575ac503552514
2017-11-22Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/set_dimension_mechanism_precision@2933 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 35002d0ff4808310af630a0dd7a5697e7c069812
2017-11-22Merge graph_expansion_blocker fix from cech_complex branchvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@2932 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c6397609dbf92cad0fdd6c0fc5365b96657edec9
2017-11-22Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/set_dimension_mechanism_precision@2931 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 44ca09283b600e6af453eb3507bb4ec92b31948b
2017-11-22Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/add_utils_in_gudhi_v2@2928 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c5b02e64769ac4af51badc9215a433c50f63299f
2017-11-21Merge add_utils_in_gudhi_v2 branch in trunkvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@2925 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7e7153337bed2b1641bb80c6c532d07f526f5b10
2017-11-20Merge to resolve svn issuevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/add_utils_in_gudhi_v2@2923 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 3bcc7619c82e7c9b91cf68ceab13ae061bf28bbf
2017-11-20Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/add_utils_in_gudhi_v2@2922 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 9ea024337f05cfc4f9a1d645c6e6ee9aac9700ba
2017-11-20Merge witness documentation correctionvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@2921 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 893873ebcabe2e9f876590f194d438018e0c83b4
2017-11-20Copy the doc from FilteredComplex::simplex to the Simplex_tree.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ST-doc-simplex@2920 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0323c23e4cd46f79439f477475df4273847aafc2
2017-11-20Branch to fix the doc of Simplex_tree::simplex(key)glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ST-doc-simplex@2919 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 86bcbd9e8cf28fa9e79901e03a4fb8ae58f963cd
2017-11-20assign_filtration bindingvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/set_dimension_mechanism_precision@2918 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 390839c0f172993f6117746d08c5a22c00778c5f
2017-11-20Add upper_bound_dimension and associated documentation for automatic ↵vrouvrea
dimension set. prune_above_filtration cythonization git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/set_dimension_mechanism_precision@2917 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 12af3c5c2d6012c43d80cc95e1ecc8a2c0df340e
2017-11-17Corrected Strong_witness docskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/wit_doc_corrections@2911 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7eba082751ee3e97bcf007946fe8be79a60680a4
2017-11-17Added the commented choose_n_farthest_points everywhereskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/wit_doc_corrections@2909 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 9f7a325facf798748c4c08e3815fbbd3d4075b78
2017-11-17Made farthest_points clickableskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/wit_doc_corrections@2908 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 452e4af3d270f02ce5bfe77309aca4a84772acba
2017-11-17Added a comment to one of the examplesskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/wit_doc_corrections@2906 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ed2a18c2c6f90c4c9f71f2415f97198473352db7
2017-11-17Modified docskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/wit_doc_corrections@2905 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2e5b2ab68008719be5835bcad4aa38fbceaf2c9c
2017-11-17Created a branch for correcting the documentation for witness complexskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/wit_doc_corrections@2904 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: e49da032662f4b878b684d8931542fc6983cd5f8
2017-11-17Homogenize shebang for Python scripts used as executablesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@2903 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 904aff059b880e4e197fd81c46160d53b5794998
2017-11-16Merge branch Nerve_GIC for the Nerve Graph Induced Complex implementationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@2902 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d35cef17512459b855ee5305be856511ac0d18b4
2017-11-16cpplint fixvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/Nerve_GIC@2901 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: e3bcc2ee7393216cb37422bc9133bf9649695a82
2017-11-16A new branch to precise set dimesion mechanismvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/set_dimension_mechanism_precision@2900 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 325b3d02bb777df6d6fffed2178a698b045fd8b1
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