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2016-12-16Warning fixesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1905 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7b7222ebe65fd01fde30f8ba527ebaee633fc87e
2016-12-16merge trunkfgodi
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/bottleneck_integration@1904 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: aaea6ba58156f8c35f80674834520220891fc32e
2016-12-16git-svn-id: ↵fgodi
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/bottleneck_integration@1903 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ab471ba8c17c17d4e52a5eaccb19ea36c5f278c8
2016-12-16Fix cpplint and warningsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1902 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 24c5aacf579eb1ceb35c680770d5168524c4c84b
2016-12-16Doc modificationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1901 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 503d38af6ee04b19ffc2feec6ee2bfd05429e9ef
2016-12-16small modificationsfgodi
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/bottleneck_integration@1900 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 31538228069cb6ef867be8aac231f11b5c8689f6
2016-12-16small modifications (doc)fgodi
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/bottleneck_integration@1899 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: e1a9e88af05611d3572830a719ca9ee0d042144e
2016-12-16intro documentationfgodi
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/bottleneck_integration@1898 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2aae46574350bb2240f83e183d471965c933fe0b
2016-12-16modifs donefgodi
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/bottleneck_integration@1897 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: f1c2ac9389d5da7556a5c47e90c68572ae97450b
2016-12-16Fix persistence rips after create_complex voidificationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1896 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d4a1258ea01bae048f30621594d0daf280fd8abb
2016-12-16separation of exactly and approximatefgodi
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/bottleneck_integration@1895 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: db94c84c29afbb94c0b0710a53e6ee417a5618df
2016-12-16Modify documentatin after reviewvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1894 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 4bd2b575d6f58aab2ea1d03b20d3e06693bec182
2016-12-16Modify doc after reviewvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1893 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 03cb7169f4b5454de0d7ce0f9946fbaa26d74356
2016-12-15Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/bottleneck_integration@1890 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: b60efeffe40fd32ba7814aefd5e9cbb3c7b454ae
2016-12-15Fix after code reviewvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1889 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 9ec3dcd290042159c313a83be3a3e8fb7bafa6e8
2016-12-15Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/bottleneck_integration@1888 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 951a081ac634f829fa49265005ea1e620f2c08ca
2016-12-15New pairs in dimension function in Persistence cohomologyvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1887 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 76bc9a951d752a6ca0f62244012965b5b6597a17
2016-12-15cancel commit of temporary testing codefgodi
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/bottleneck_integration@1886 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 03f3e6515fd74fd2ae8d1de6b7febb4af7607fb5
2016-12-15small modificationsfgodi
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/bottleneck_integration@1885 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 111fc4e381223fc2d4b6e6c71b61dd1552c7cc95
2016-12-15Merge subsampling fix from branchvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1884 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 73dc09e01da47957fd225e15e8733d110d048a36
2016-12-15Modify random and limit tests casesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/subsampling_and_spatialsearching@1883 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 385f334f9358ae62c2ba6ec0d652ecfd52a052a7
2016-12-15small modificationsfgodi
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/bottleneck_integration@1882 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 11247904405f3da37514e5cc4848c6971edb4254
2016-12-15Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/subsampling_and_spatialsearching@1881 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 597eb5b036e3e1d7e10fa0aac135cfc49c031962
2016-12-15Merge tangential_test branch to fix tangential bugvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1879 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: f05e229a7b076c8c98b59e36b6be46f03fefbc80
2016-12-15Remove unused modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tangential_test@1878 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1b3dafad298e0caa87825ce47f6e8ac3983206a0
2016-12-15namespacefgodi
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/bottleneck_integration@1877 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0d15f01525272ec8bea7436fa18dbac213becf0a
2016-12-15Fix max issue on Windowsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tangential_test@1876 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 957e2196a4a56308f76c0f55d182ffd3952eaf4e
2016-12-15Remove example.cppvrouvrea
Remove tangent traces in Tangential_complex.h Modify test_tangential_complex.cpp to make UT work git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tangential_test@1875 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1bd09671ca6f30c66cce7b48b382e1a8e4fbd3b5
2016-12-14Added an example with a distance matrix for the farthest point algorithmskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/subsampling_and_spatialsearching@1874 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 340e465189dc7ec8f8706e60e2d8097b53bfd5a0
2016-12-14Bug fix for degenerate casescjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tangential_test@1873 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a292246c5e85275ec8bbf293fa0157d6693121cf
2016-12-14Points perturbvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tangential_test@1872 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: f194dac5b999169fdf29fbb9223f0ee9db9c12ba
2016-12-14Add tracesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tangential_test@1871 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: b37d7be6b0f2ecc5217180e7ce3b14ab338c2354
2016-12-14example modifvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tangential_test@1870 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 43cf0d0b91808445614a3dc3d51ee87679c1a5d1
2016-12-14Improved the documentation for choose_farthest_pointsskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/subsampling_and_spatialsearching@1869 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 08223b7d1788c73b0fb3fc7255a6386896b63626
2016-12-14Rollback pointer modification, and use of of a hack for no deep copy of ↵vrouvrea
boost graph "voidification" of create_complex method git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1868 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 3667c8f57388dec0300d1fed8bf1b063843727dd
2016-12-14Merged trunc to branchskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/subsampling_and_spatialsearching@1867 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 20d5120a0702522b632008bfc6a5257c70c849d1
2016-12-13Use of a pointer for the rips skeleton graph member variable to avoid deep ↵vrouvrea
copy of the structure. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1865 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fe745c7c61d9149689521c1cb9e750b2682179b5
2016-12-13example point displayvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tangential_test@1864 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1a97b8a9c1f7aff6cdeae8a2fa0eef911f4a5596
2016-12-13Example modificationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tangential_test@1863 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0706eed9656c214bbabfa9a8da2f800c2afdf140
2016-12-13Add example just for Mac test. To be removed.vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tangential_test@1861 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: be598143de42dba782462985515cbc77b0a51e8b
2016-12-12Fix for doc reviewvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1859 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 3460f25024dc952a3313322111ffb1b3eef5abda
2016-12-12Doc changed for reviewvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1858 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2b70b619233362adebdc3046c923090fac53a660
2016-12-12Doc fix from reviewvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1857 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 88619abff993bd776310f18034d2ab5fa0b41944
2016-12-12rename simplex_tree variable namesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1856 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: aa283b26d5c31577698dcec271e7b0ef95b4bd0f
2016-12-12Remove comment // to construct a simplex_tree from rips complexvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1855 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2be10c7952457b0f6210c4bbbce82eaa250498a7
2016-12-12parenthesis for std::min because of Windows min global functionvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tangential_test@1854 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 4540b7f111515cbe8e9e53c78fc00111533306f1
2016-12-12Use (std::numeric_limits<std::size_t>::max) to fix Windows global min maxvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tangential_test@1853 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 970c2190f89a6f11712edc07c1980ce0cbdb486b
2016-12-12Fix max issue and remove (&tr == NULL) testvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tangential_test@1852 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 932aa53773092c64f1d69ce0d4c0fdaf817b5b06
2016-12-12Fix euclidean_distance in accordance with peer reviewvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1851 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 998c4f281a90842d598f3fe840a8526865ff9830
2016-12-12Fix the bug, remove tan_test from examples and add a unitary testvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tangential_test@1850 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 852570382d6f5713e534b49e7abf1e96a4a84076
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