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2018-10-30removed template Kernel2Dmcarrier
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3965 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0cfdece6eb19cb8601371bc96e1dbb66ae41a086
2018-09-18templated Kernel parameter in Persistence heat mapsmcarrier
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3896 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: b496194cbe5447fe040140e9fbef3beb39fd9fbc
2018-09-17small changes for efficiencymcarrier
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3894 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: bbd14832b99de309128f9a5a43f4b296d5df0476
2018-08-23git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3830 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 04f64bf534f31e593769a1222f7b3256db6b39d7
2018-08-23changed docmcarrier
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3829 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 77b9c8a4cd00555c2930229d083a88c298c22db5
2018-08-23rm Doxyfilemcarrier
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3828 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 501fca20271b60930f8078d29413a192c87f1962
2018-08-23git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3827 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a6a297a7f14703e55954706328072acdd447484c
2018-08-13git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3778 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 189ac5572f69842e1d8d1cec68ca6a4f62e39bd4
2018-08-13git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3777 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ad63240c8796bcc8571ca489d7f5d8237bb22d78
2018-08-13Clarify installation, utilities and examples generationvrouvrea
Add a link to the Hello GUDHI World project git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3776 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: bb4dea879baac0280b38ee7ab9f466e0c090a38c
2018-08-13Modify GUDHIConfig.cmake in order to have :vrouvrea
Order is : 1. user defined GUDHI_INCLUDE_DIRS 2. ${CMAKE_SOURCE_DIR}/include => Where the 'cmake' has been done 3. ${CMAKE_INSTALL_PREFIX}/include => Where the 'make install' has been performed git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3775 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 506357257ce261cb2778e357ca902401da4838e7
2018-08-09Make human.off copyright clearervrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3766 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 6d79fe7a1d0892476e70fd255a7cd0cef0d08823
2018-08-09Copyright clarification for human.off filevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3765 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: b3da155682259c8df1cabb587c8d60c79c75cdc9
2018-08-09GUDHI_CAN_USE_CXX11_THREAD_LOCAL was missing in ↵vrouvrea
Persistent_cohomology::annotation_of_the_boundary git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3764 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7d53de701470203e48f76896e2859d1df670564c
2018-08-09Merge ninja_cmake_warning_fix_vincent branchvrouvrea
Fix issues #4, 6, 13, 14, 15, 21 git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3760 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 32b5cc470f6095a64f102e0e641e13d2fc9d63ff
2018-08-09Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ninja_cmake_warning_fix_vincent@3757 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: f7f31a9a2448c7e894aa63b46360f59bc92f54b3
2018-08-09Make soft dependency for matplotlib and numpy dependenciesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ninja_cmake_warning_fix_vincent@3756 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 13a2e6e3eea8a36d0b9bdb4ab1c34f940a8932dc
2018-08-08Fix issue #4 : [CMake - global] List all that is missingvrouvrea
#21 : [python - global] Additional information on how GUDHI was compiled could help to debug users problems git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ninja_cmake_warning_fix_vincent@3751 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ded8b49b7e282dbf262df5695f2b5285a9907551
2018-08-07Fix issue #13 : [Global - utilities] use exit(-1) instead of std::abort in ↵vrouvrea
utilities git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ninja_cmake_warning_fix_vincent@3749 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 3235f72cc618dcb6ab70b1826a4d3ce2608fa168
2018-08-07Doxyfile is now generated to facilitate gudhi version packaging and new ↵vrouvrea
module process Doxyfile.in generates a build/src/Doxyfile that is copied by the user_version target (to avoid file generation in sources) git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ninja_cmake_warning_fix_vincent@3748 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0a5ab637c2db102a59c994f03f0ec7fadbda3780
2018-08-07Remove if cmake version in GUDHI_user_version_targetvrouvrea
doxygen target is depending on user_version only if defined (defined in dev version, but not on user version) git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ninja_cmake_warning_fix_vincent@3747 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2e9533581d7b9ec231b27b7c405dd3817baf4911
2018-08-06Fix issue #14 : [RipsComplex] max_edge_length documented with type 'int'vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3743 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 9ef2e20e818fc1c573ce784cd34acb3c6d9970b7
2018-08-06Fix issue #15 : [python - subsampling] sparsify_point_set wrong documentationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3742 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fcb4ba73cb1c4527a9f772bb9412f5e15c4eafaa
2018-08-02Rename branchvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ninja_cmake_warning_fix_vincent@3730 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7ae1d7eb06f34779f69a102551dcc263559eb2bf
2018-08-02A branch to fix ninja cmake warningsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ninja_cmake_warning_fix@3727 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 113c5836f058d1ae86d41931bc118c1b9ba4b89d
2018-08-02Fix compilation warning that was a bug. Value was not returned.vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3726 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5f1b8b40a1e68c655857ccc7b0de7f86a38c63b8
2018-07-22Mark functions as inline.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3699 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 431a0f7e2169ac7ebbdc6e4bd3458176030261ff
2018-07-03corrected test unitsmcarrier
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3662 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5b37dde84d00538ff15b7e638ba1f2d6800573c0
2018-07-02Merge python_nerve_gic branchvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3661 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: e69e38e22a478a7f2d6cbb7656c66743baf53a4b
2018-07-02Merge Nerve_GIC modifications from Mathieu (11th of June 2018)vrouvrea
svn merge -r3468:3579 ^/branches/Nerve_GIC git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/python_nerve_gic_vincent@3659 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 9e0e70cccf2829d7d55d241b807aeff0b73094bc
2018-07-02Fix unitary tests after trunk mergevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/python_nerve_gic_vincent@3658 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 13570cb36f31c353cd8fa58f5b66ac0a00bb0eec
2018-07-02Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/python_nerve_gic_vincent@3656 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1f02e2f3b3e716d6578be49437e7d0b33fa99e5b
2018-06-29clang-format filevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3653 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 97cf0cc3bee58b1f7d96a3cfa0f20b0f0a3cb7ec
2018-06-27merged trunkmcarrier
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3644 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2be9ba6b6a381e677081a751e7d8f8c1d79385b0
2018-06-23git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3628 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 12f32a1c8ca31e7e0a40e1c3502e2a3d810d5bc5
2018-06-14css for https version of the website must be in a valid https locationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3616 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 6a85178a0299c744e26b7a98e92c515d9a721039
2018-06-14New website header to facilitate releasesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3614 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: aca53e98d8dbfcdde96df5be045acc012ba8608f
2018-06-14small modif on PWGKmcarrier
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3612 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c0b8c70acfbf1a7f4b7bddb69a161086fb249c76
2018-06-13Version 2.2.0vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3605 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5f3ff4c1fbd5a2a842f821a40ab90584c1dcf8d0
2018-06-13Fix cpplintvrouvrea
Merge branch persistence_representation_bug_fix_vincent rev. 3600 git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3603 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7e9364e5294b3433eddcebf273924193da3b0742
2018-06-13Rollback these commit (was just for beta version documentation website)vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3602 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c0182e445f444bbf1add347dac217322262db033
2018-06-13Fix cppcheck issuesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3601 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 44cc04b1609d3b3d40382fd02d4fe15e5ba0159f
2018-06-12Quick fix for infinite loop: drop extra precision in step computation.glisse
I am not saying this is what the code should optimally look like... git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3590 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0253d73afb1b1b565b45d214ea2d948e00c7db25
2018-06-07Fix alpha complex user pseudo code on documentationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3565 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 4b4300ef95fac962dd2c4d6a44c5c9f80ca6bc4a
2018-06-07Use release candidate instead of beta tagvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3563 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 85f92deeb18049186357a93f1d746ad2e5570cc0
2018-06-07beta version for Gudhi 2.2.0vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3560 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 470fd4feeb480a415a03d5378f5734fd42f2411a
2018-06-07Code review : Use thread_local when necessaryvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3558 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0893cfa1065dcd9988c9d910e764b7a1edbcdc11
2018-06-07fix Cubical python documentation (no more simplicial references for periodic)vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3555 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 198a65222029760e0ff5cd5e576c3281833b307c
2018-06-06Merge of branch thread_local_optional_vincent to take into account XCode < ↵vrouvrea
v.8 as thread local is not available git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3554 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 9dcf072a4606d1131a925bca4571f0f1b5547d14
2018-06-06Merge paralellized version of Nerve_GIC fix for CoordGIC from Nerve_GIC branchvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3552 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 384a6362a19da625b09879ad6eb7573c48a52940