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2018-11-16Doc review : Bad copy/pastevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/toplex_map@3993 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 20fe516698230f532c38535ec21b89dc12b7a9d9
2018-11-16Add some tests for empty toplex managementvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/toplex_map@3989 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 37ae2287e7905210bc2e699eacbc656ba873e40d
2018-11-16Doc review : Rephrase remove_vertex docvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/toplex_map@3988 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 9930dc524fb4d646135a53e07cc8b8934528442d
2018-11-16Code review : No need to use Toplex_map::Vertex inside Toplex_map classvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/toplex_map@3987 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1e419e7d7efbfdc47a250c32209613f48ab46745
2018-11-16Doc review : Simplicial complex terms instead of toplex map ones.vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/toplex_map@3986 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5f8c05b80f6cb4db8f64aaaf33869495a3e7be7b
2018-11-16Doc review : Simplicial complex terms instead of toplex map ones.vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/toplex_map@3985 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: b8debf06602f03185929ac7b33e2b49ea69deaad
2018-11-16Doc review : Gamma_0 instead of gamma_0 to be like in the papervrouvrea
toplices is the plural form of toplex (not a set of toplex) git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/toplex_map@3984 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 4cfeebffcbf9006fd98bbf32a8dbd9eb683c9bf5
2018-10-16Add copyrightsvrouvrea
Fix cpplint git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/toplex_map@3959 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 02c873347468e28d50f0c8ac385be988c07c96df
2018-10-16Remove Filtered_toplex_map and its derivativevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/toplex_map@3958 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2833261794ce5bda7a0e120cde6a7851553bd00c
2018-10-16Rename Lazy_Toplex_map accordingly to code conventionsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/toplex_map@3957 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7e73d088dbc458f42219e6f7a50baf98d8db65ed
2018-10-16Add lazy_toplex_map_unit_testvrouvrea
Class documentation rewrite Fix conventions in code git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/toplex_map@3956 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 65f79ee3c0f22157b2cedfc498e5d9c97dd055f6
2018-10-16Toplex definitionvrouvrea
Remove witness complex graph to compare Toplex_map vs Simplex_tree git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/toplex_map@3955 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5a1fc1be157b74963faa98b7844b8b47e54a82b6
2018-10-16Resize map.pngvrouvrea
Add simple_toplex_map in test git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/toplex_map@3954 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 8899f42427e297b4527147a051adab1f9e8850dd
2018-10-15Toplex_map indentationvrouvrea
simple toplex map example git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/toplex_map@3953 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 253f001adf27dbe8318ae12996f32b07e4fab139
2018-10-15Remove Simplex tree edge contraction that seg faultvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/toplex_map@3952 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c2ac4648bed0cf72d1a1bfa0697708f04e258ec5
2018-10-15Add num_vertices methodvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/toplex_map@3951 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: f91b42722e47c05da799ac40038f9f12eb70f974
2018-10-12Add some unitary testsvrouvrea
num_maximum_simplices results are a bit strange git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/toplex_map@3950 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 86c7a4607f9d774c89c79dcc6d95f1ce2f5951d5
2018-10-12Remove all documentation from user manualvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/toplex_map@3949 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ef6f0dd7622590ae3d550162174120c2e0406cb7
2018-10-12Bad comment for lazy num_maximal_simplicesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/toplex_map@3948 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: f0926058af8b0cfc77c9346feda6f6c4db2c9828
2018-10-12Rename num_simplices num_maximal_simplicesvrouvrea
Make unitary tests working git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/toplex_map@3947 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: eddea297f7cf6a0fd172ceaa3fbb28b6e3cb2e63
2018-10-12Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/toplex_map@3946 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 213c7b76c5f8c3248b24a2ac9250ed59034d8076
2018-10-05Message to debug Mac issuevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3934 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 24e8a83ab317c5d94140638c76f91e68c1b3ce0f
2018-10-05pastoglisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3933 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 3fc8b696f0c457256e0c8bf74ffffa580dbb69d4
2018-10-04Documentation change for github websitevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3932 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7044071afd3a3e629ea66ed3647c00d023f60692
2018-10-04Merge branch windows_warning_removal_vincent to fix warning level at 3 for ↵vrouvrea
Windows (level 4 is too verbose) git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3929 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fff76c74c6ccea48e3bba55fe929e58557c09b3e
2018-10-04Merge of branch plot_persistence_density_vincentvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3927 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a996b8e1ddcdb53f9ea6dff341ae5f1bad26639c
2018-10-03Modify "-pedantic" compiler option management in order to be tracedvrouvrea
Modify windows warning level git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/windows_warning_removal_vincent@3926 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1c6e61fb968b6b4072b86a520e2edf78aedf1ffa
2018-10-03A branch to remove some windows warningsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/windows_warning_removal_vincent@3925 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 534aaedd708f85fc6a27abbb65d4041e3c960b13
2018-10-02Merge of last modifications on Nerve_GIC branchvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3923 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 785b87581429e8973b9660db0940b9dfb5d37827
2018-10-02Catch exception by const&glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3922 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1b0cea99516d6b42e5ab3b0fdb21468b321e6d6c
2018-10-02Doc review : Explain that plot persistence density function doesn't handle ↵vrouvrea
degenerate data git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/plot_persistence_density_vincent@3920 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7794f7959b98b0245e26077d2f2639f33655d5c9
2018-10-02Code review : remove executable propertyvrouvrea
Doc review : Rephrase inf_delta explanation git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/plot_persistence_density_vincent@3919 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: b45697b675a20cdca7bb42fa7a555df6c35fe0fd
2018-10-02Doc review : "Selected points are" -> "Selected intervals are"vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/plot_persistence_density_vincent@3918 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 79857a4609428fc623f8f4656762261ea664cf12
2018-10-02Doc review: max_intervals documentation in plot_persistence_densityvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/plot_persistence_density_vincent@3917 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 90cfd77ad4aad4cdb0937f43dd4f802688f98295
2018-09-28Fix typo in installationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3915 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: b7f7c3344fef9915a48ee29764063a91f3d860a4
2018-09-28Python Nerve and Graph Induced Complex was introduced in GUDHI 2.3.0 (not 2.1.0)vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3914 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 8e34cf876daf73288caed371c7ce9c51f07fbf7f
2018-09-28Merge branch cmake_missing_modules_clarification_vincentvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3913 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0229ce351cdadf2a8f659f1986f45b5e22669420
2018-09-28https://gitlab.inria.fr/GUDHI/gudhi-devel/issues/32 - [Cmake - Qt5] CMake ↵vrouvrea
outputs an error when Qt5 is not installed Modify/add cmake messages for missing modules git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cmake_missing_modules_clarification_vincent@3912 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 37e1035f7c27ce994e05386801d72959696de7d4
2018-09-26A new branch to clarify cmake missing modulesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cmake_missing_modules_clarification_vincent@3911 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 9528d9cba12b9b9ccb220b1c11df1095fe3fcd21
2018-09-20fixed small bug on persistence diagramsmcarrier
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/Nerve_GIC@3901 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: cbeecd2f928b4c4df13acf5a7a2083882fdc98d2
2018-09-18git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/Nerve_GIC@3897 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: f5fe42a6f42443ca7217c69f8a18780cdb85669e
2018-09-10Code review : More explicit message when import fails in plot persistence ↵vrouvrea
graphical tools git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/plot_persistence_density_vincent@3881 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 96f9e3da3bd68d6cba65242b9890c4beb463c863
2018-09-10Doc review : Add a link to scipy.stats.gaussian_kde official documentationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/plot_persistence_density_vincent@3878 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: dd6e1a4131be1ed0306a48f9b095e0d09ddee848
2018-09-04Use debug or release version to link with python packagevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3871 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: afbd5c833ddc3a525d7091ab186714825109eb87
2018-08-31Link with release third parties library version, even in debug modevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3863 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: e33e15081b3029d9dfd4edc464d91b0db47e1754
2018-08-31Add script to automize gudhi version creationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3860 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fc01077dc2120e5c5ad2190a5f0444859ecee426
2018-08-31GUDHI release 2.3.0 candidate 3vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3859 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 42d7dda810e3a2f6d0d38c15f3a8ff6f86670d51
2018-08-31merge windows_cgal_non_header_only_compilation_issue branchvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3858 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d8bdddfa4488b7bfdc20451959bf505d290b429c
2018-08-31Works fine in debug and release modevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/windows_cgal_non_header_only_compilation_issue@3857 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2cc11e2a6e7f8eed6c234c17cad7ff04efdbc659
2018-08-31Try with boost release and debug lib versionsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/windows_cgal_non_header_only_compilation_issue@3856 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 130a4319577ef0ec8c10a87c98b7ffcf6f16d808
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