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choices more orthogonal
Rename Alpha_complex_3d_options.h Alpha_complex_options.h as it can be used by Alpha complex dD
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_3d_module_vincent@3875 636b058d-ea47-450e-bf9e-a15bfbe3eedb
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orthogonal choices
Only examples work for the moment. Periodic to be tested.
Add Alpha_complex_3d_from_points.cpp example. Maybe to be removed.
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_3d_module_vincent@3840 636b058d-ea47-450e-bf9e-a15bfbe3eedb
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Remove duplicated example (cf. the one in the Simplex tree)
Add the example for documentation
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Fix debug exception mechanism
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_3d_module_vincent@3712 636b058d-ea47-450e-bf9e-a15bfbe3eedb
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git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_3d_module_vincent@3645 636b058d-ea47-450e-bf9e-a15bfbe3eedb
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periodic
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freed.
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weighted periodic option
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Compilation flags are now externalized in cmake/modules
Add NO_POLICY_SCOPE for GUDHI_third_parties to fix warnings
Try to fix CGAL 4.12 that is no more setting CGAL_LIBRARIES
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cmake_v3_vincent@3445 636b058d-ea47-450e-bf9e-a15bfbe3eedb
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xml test results is now generated out of source
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Add specific GUDHI test coverage function
Rename cmake/modules/GUDHI_*.txt
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New target CGAL_WITH_EIGEN3_VERSION set with CGAL_VERSION when CGAL and Eigen3 found to ease CMakeLists.txt
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cgal_4.8_issue@2241 636b058d-ea47-450e-bf9e-a15bfbe3eedb
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Fix doc issue
Still doc issue
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simplicial complex
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CGAL find package in root CMakeLists.txt for Witness complex
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Alpha_complex instead of Alpha_shape
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+ Missing Boost_THREAD_LIBRARY
+ Useless typename
+ Use TBB_LIBRARIES
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/fix_naming@1274 636b058d-ea47-450e-bf9e-a15bfbe3eedb
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remove cython directory from doxygen parser
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Add Eigen3 in installation
Add alpha complex in introduction
All examples directory moved to example (was example/common, example/Alpha_complex)
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/Doxygen_for_GUDHI_1.3.0@1110 636b058d-ea47-450e-bf9e-a15bfbe3eedb
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Delaunay_triangulation_off_rw.cpp with
Points_off_io.h and CGAL_points_off_reader.cpp
Adapt UT and examples for this
Adapt Alpha complex for it
Alpha complex is now inserting points in a faster way (after a spatial_sort).
Remove Alpha complex construction from a pointer on Delaunay triangulation (no more needed).
Adapt documentation to all these modifications
Forbid copy/move constructor/assignment operator on Alpha complex
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1098 636b058d-ea47-450e-bf9e-a15bfbe3eedb
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vector of Points is a more efficient way (instead of inserting points on the fly).
As consequence, the documentation needs to be rewritten as the points index are changed.
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1046 636b058d-ea47-450e-bf9e-a15bfbe3eedb
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Still issue and lot of logs in simplex_tree::prune_above_filtration
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@945 636b058d-ea47-450e-bf9e-a15bfbe3eedb
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code review fix
fix prune_above_filtration removing every simplices
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@927 636b058d-ea47-450e-bf9e-a15bfbe3eedb
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More verbose in debug mode (use NDEBUG instead of DEBUG_TRACES)
GUDHI_CHECK function to throw in debug or ignore in release mode
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@911 636b058d-ea47-450e-bf9e-a15bfbe3eedb
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prune_above_filtration and remove_maximal_simplex in Simplex_tree.h
make_filtration_non_decreasing and rec_make_filtration_non_decreasing in Simplex_tree.h
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Alpha complex code review.
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Bar_code_persistence and alpha_complex_persistence
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Alpha complex from delaunay triangulation in static dimension
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in doc)
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