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2019-08-14Fix #35 Modify Copyright as GUDHI is not only a C++ libraryROUVREAU Vincent
2019-06-13Change CopyrightROUVREAU Vincent
2019-05-10Fix blocker formulaMarc Glisse
I had copied it straight from the paper, without adding the factor 2 we have everywhere.
2019-04-16Add min and max filtration values for the sparse RipsMarc Glisse
2019-04-13Fix the documentation of what relation i and j satisfy in the lower ↵Marc Glisse
triangular part of a matrix.
2019-04-13Handle triangular matrixMarc Glisse
2019-04-11commentsMarc Glisse
2019-03-19FixesMarc Glisse
2019-03-19Filter during expansion. Completely untested.Marc Glisse
2019-03-19Start fixing the sparse rips to match the true definition (not a clique complex)Marc Glisse
2019-01-17adjacency lists can be directed, undirected or bidirectional for Simplex ↵vrouvrea
tree insert_graph method Use of directed adjacency lists to fasten computation and use less memory git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/adjacency_list_direction_improvement@4061 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 839fabc15398ce590d09806bd783cd656029f3c1
2018-06-13Fix cppcheck issuesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3601 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 44cc04b1609d3b3d40382fd02d4fe15e5ba0159f
2018-04-26Fix Copyrightsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/copyright_clarification_vincent@3400 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ff348beedf92656c6913c2a1df983b5804b33988
2018-04-04Merge sparse rips branch in trunkvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3336 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 01dcab006197637ccba9c29f8990375fe05ad7b4
2018-02-02epsilonglisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3209 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c7cac815867c94821d13d8dd972e6505c43b04ba
2018-02-01git-svn-id: ↵glisse
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3208 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2e0fd8691e04dd1088673910258017802370d265
2018-01-30Double all filtration values.glisse
It was using the Cech convention, not the Rips, so the Rips approximation was not close to the Rips, which is likely to confuse users. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3188 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7b948c956f39dc75931cb00a64516d08ff42e435
2018-01-26doc for epsilonglisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3162 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 02ec0665d288e7e68959aa188cd291924a7d1c8f
2018-01-16Initial commit of sparse Rips, based on Rips_complex.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3137 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: f0550a0a24a25e8d9ab16535eb4364e8dc4228e6
2017-01-25Fix code reviewvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/rips_doc_fixes@2009 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: e002ed07e5dd559690ddef60cac4d5941ba4def3
2017-01-25Fix code reviewvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/rips_doc_fixes@2008 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d742fb816e1c83a85400d2f0c187e045dcea362f
2017-01-19Fix ccplint issuevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1956 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 01ffb1d403c65a90d081cf17fe8f595c11a34bab
2016-12-16Modify doc after reviewvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1893 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 03cb7169f4b5454de0d7ce0f9946fbaa26d74356
2016-12-14Rollback pointer modification, and use of of a hack for no deep copy of ↵vrouvrea
boost graph "voidification" of create_complex method git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1868 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 3667c8f57388dec0300d1fed8bf1b063843727dd
2016-12-13Use of a pointer for the rips skeleton graph member variable to avoid deep ↵vrouvrea
copy of the structure. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1865 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fe745c7c61d9149689521c1cb9e750b2682179b5
2016-12-12Fix for doc reviewvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1859 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 3460f25024dc952a3313322111ffb1b3eef5abda
2016-12-12Doc changed for reviewvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1858 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2b70b619233362adebdc3046c923090fac53a660
2016-11-23Fix cpplintvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1771 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 994e3bf769d236d230ac2f7e751aa310dabb74bb
2016-11-21Add distance matrix rips construction (doc, code, test)vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1766 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 6b9bdecbaf0aca12facb023e66bdea71e8e8cd38
2016-11-18Add distance matrix read from csv filesvrouvrea
Distance template instead of Point_d for distance matrices git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1762 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 695bead714228c57e1be1650048125aa0b841683
2016-11-17Modify examplesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/rips_complex_module@1757 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 4b6f26947ad16f440ea4d4b7cb5e145a58f28dcb
2016-10-03Fix doc issuevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/rips_complex_module@1611 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ed254b9a2b953723aa1a10623f688613f3a0c408
2016-09-30Fix compilation issuesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/rips_complex_module@1596 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 343308ef914e6a6617890f49a55eb0bb8db15ee9
2016-09-28Add rips complex module and first modification stepvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/rips_complex_module@1577 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fc949570c6cffa4756f84a15c41fadc8c45b2af2
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