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Add TBB in Doxygen
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/Doxygen_for_GUDHI_1.3.0@1086 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: e3d3251431193d21ebf9344c230d12df624cd905
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Homogeneize the author/copyright sections of modules
Exclude data and GudhUI from doxygen
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/Doxygen_for_GUDHI_1.3.0@1085 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: 1b89161f3253553a02935885334b2fc6cf58055e
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git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1073 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: 95dca83fa459abd902624bf2a5f631925e4cf9b0
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git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1072 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: 1958a5ee06c339d8cd8cdaae92358d2fff445a7a
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instead of calling initialize_filtration()
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1071 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: 6fdc1797ac6e7b452abe150643f0ec9578c3bbab
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Reverse GUDHI_CHECK calls.
No exception when no point is given in contrction.
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1070 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: bf6a08d48b5b29a5b24bf5107116e399dfc0a6bc
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git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/Doxygen_for_GUDHI_1.3.0@1064 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: f5555f6096c5d3786d519679f118467303ac6172
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git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/Doxygen_for_GUDHI_1.3.0@1062 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: f7d2fad28cb01ea0970b63d695f53ec9e65723c3
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git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1060 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: e7640912b59f8bb7357316e4a5cf3d75898dca21
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git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1053 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: 5e263835e662d66ef068c73d3efe71f72f90de10
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Fix some cpplint/cppcheck defaults
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1051 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: 9cfd8c7f7f9c82998a4c9d2d00f105ed16690208
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function in order to let the user empty the tree
To empty the tree, call initialize_filtration() and prune_above_filtration(-1)
Add a UT to test this case
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1044 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: bb4a916fb547c6312f2138d355903ef87525e9c4
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be not up to date
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1043 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: b17d8ef63bc173b4c4b6b0bde31f97d85672a754
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git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1041 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: 783218b56e34ef53fbca5bb52e8a467504c0eddc
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git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1040 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: 1b20d31e129b9aa7f2d884aa935a53959a288650
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web site.
Add a package overview on top page.
Remove text that was redundant with the web site.
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/Doxygen_for_GUDHI_1.3.0@1035 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: 95d6c0e2f0ed8389620c27c03e37d441f93787ee
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git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@999 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: 4bfc8fe6051480854acbd68fdb5c6f09624aa3da
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go through the tree in reverse mode (starting from the right part)
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@997 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: 0c8f8aeabd7dcba26971381c425ef7b0b417138c
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git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@996 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: 20e4b949af8e4481c13e8a91181fe772c696f01a
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git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@995 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: aa4ba97eecefb03e01a53ae1e2b50248a0857043
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Ut rewrite
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@974 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: 3326338b9454923b59d3e42add0f3530c6dbe16f
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Make it non decreasing for border and not only for parent.
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@972 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: e71f40baa56de53e68b02603b64fb504b1f5d978
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debug_tree function
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ST_insert_with_subfaces_fix@967 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: dd4b15dc8f2a4795d3a0b6fdcf4938aff152906b
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git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@959 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: a5c6ef0ae2ee1e18fff88b98131ff4d14a252152
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git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@957 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: fa837fd1a4373c2322db16353d98767907f34c79
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git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@956 636b058d-ea47-450e-bf9e-a15bfbe3eedb
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git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tbb@953 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: 06624ae4ed4031c7bae56e0b8fa305a318b934bc
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git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@951 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: 4b66d24e46b604e2066c4c2e506b147af4be7e6a
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git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/contiguous_vertices@949 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: b20b49bab38fdcbc6571c159200125148e9a1bd6
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Still issue and lot of logs in simplex_tree::prune_above_filtration
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@945 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: cd4f60ddcacb0444e0eb3b9323d8042eb49b132e
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Add alpha complex in bibtex
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@929 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: c8975be439b3e9e91d1fd6ad988db12c75d0395b
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code review fix
fix prune_above_filtration removing every simplices
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@927 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: 1660da972bd5198214a0f0384be9be66a5312e74
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More verbose in debug mode (use NDEBUG instead of DEBUG_TRACES)
GUDHI_CHECK function to throw in debug or ignore in release mode
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@911 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: 250dc0c0f5146f0b9e3fce0e9a8ca0da6af7cf98
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prune_above_filtration and remove_maximal_simplex in Simplex_tree.h
make_filtration_non_decreasing and rec_make_filtration_non_decreasing in Simplex_tree.h
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@910 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: a20c9da65a5a3294e42ad2dd45a399d77fb5ad30
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2013, however I believe it will just ignore the change so it should not hurt. (I'll revert otherwise)
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@904 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: 8f29072c7f5bfa24de5033ada6b377deaf0c8689
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Simplex_tree_options_full_featured switches to the safe default of allowing non-contiguous vertices.
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/contiguous_vertices@896 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: 60bc11a90027ed17233903d22a6494198f30eeb1
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Alpha complex code review.
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@894 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: 702c4d667de4e7191d1050e6d855d2f79117f954
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Bar_code_persistence and alpha_complex_persistence
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@893 636b058d-ea47-450e-bf9e-a15bfbe3eedb
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git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/contiguous_vertices@862 636b058d-ea47-450e-bf9e-a15bfbe3eedb
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git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/contiguous_vertices@859 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: ba38ae19afbfbb095dddd6b7203c8ff18d876c70
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No build machinery support for now.
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tbb@858 636b058d-ea47-450e-bf9e-a15bfbe3eedb
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git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@856 636b058d-ea47-450e-bf9e-a15bfbe3eedb
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git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@853 636b058d-ea47-450e-bf9e-a15bfbe3eedb
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git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@845 636b058d-ea47-450e-bf9e-a15bfbe3eedb
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git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/contiguous_vertices@838 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: 5b4475f39fe6adf2190223a753625057260e8805
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For now only used and checked in find_vertex.
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/contiguous_vertices@833 636b058d-ea47-450e-bf9e-a15bfbe3eedb
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simplex_tree_from_cliques_of_graph.cpp - #include "" vs #include <> for skeleton blockers
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@826 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: 1bd1ad535e4283bce35eeb31fa8d7896b9de474b
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Simplex_tree.
The size can never grow very large (bounded by the dimension, which is bounded by the log of the number of simplices) and this avoids a lot of dynamic memory handling.
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@825 636b058d-ea47-450e-bf9e-a15bfbe3eedb
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git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@822 636b058d-ea47-450e-bf9e-a15bfbe3eedb
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git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@820 636b058d-ea47-450e-bf9e-a15bfbe3eedb
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