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2021-05-25Add a separator argument that goes with the ↵Hind-M
rips_complex_diagram_persistence_from_distance_matrix_file_example input file Specify explicitly the separator when using a specific input file
2020-01-27Code review: Use std::clog instead of std::coutROUVREAU Vincent
2019-12-06Modify boost tests to be more verbose and errors in colour. I kept coverage ↵ROUVREAU Vincent
tests (was only used by Jenkins) and they still can be activated through an option
2019-08-14Fix #35 Modify Copyright as GUDHI is not only a C++ libraryROUVREAU Vincent
2019-06-13Change CopyrightROUVREAU Vincent
2019-06-05Fix #20: Add OFF section in file format and all documents target to it ↵ROUVREAU Vincent
instead of geomview.org documentation. Modify data/points/alphacomplexdoc.off in dimension 3 to be used as an example for OFF section in file format.
2018-05-15CMake minimal version is now 3.1vrouvrea
Compilation flags are now externalized in cmake/modules Add NO_POLICY_SCOPE for GUDHI_third_parties to fix warnings Try to fix CGAL 4.12 that is no more setting CGAL_LIBRARIES git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cmake_v3_vincent@3445 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0ac7613f016e28cc634606f76e85ecaf5bacb2d4
2018-04-26Fix Copyrightsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/copyright_clarification_vincent@3400 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ff348beedf92656c6913c2a1df983b5804b33988
2017-08-10Add Gudhi namespacevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/persistence_diagram_improvement@2605 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 6f004d1f7f8a741081181c1ead026fb952a21e6c
2017-08-09Merge last trunk modificationsvrouvrea
persistence file reader Python interface persistence_graphical_tools improvement (max_plots and max_barcodes, and from a persistence file) git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/persistence_diagram_improvement@2604 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: db80333d4f34151be0c32024af597d90d221a97f
2017-08-08Fix bug in read_persistence_intervals_in_dimension for only_this_dimvrouvrea
Add unitary tests for read_persistence Add .clang-format to clang format new files git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@2601 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 28e870973f9ebd686d503246202fa6d6a549e9e3
2017-07-04Add Gudhi namespace for reader_utilsvrouvrea
Add confidence band in persistence_graphical_tools.py Persistence_diagram returns a plot that is no more showed. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/persistence_diagram_improvement@2582 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 4125f4f525057e89c8b0d5d164ea0b9d1df1bd72
2017-06-02Get rid of Boost_system library linkvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/boost_system_no_deprecated_test@2509 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 52deba0f2212767b99b801810d356e55417225db
2017-04-19Rename tests and examples to be consistent with the naming rulesvrouvrea
xml test results is now generated out of source git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/add_test_windows@2364 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ae2dd1592b63f4e7da5e17655761697b6daf7dd0
2016-11-22Fix examples and testsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1767 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 4a1c78aec05d443e0525bf24a0cc7f7b5c628629
2016-11-21Add distance matrix rips construction (doc, code, test)vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1766 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 6b9bdecbaf0aca12facb023e66bdea71e8e8cd38
2016-11-21Add distance matrix reader test casesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1763 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: cae9765c56ff6e0a213a7835bab56f3618e4d942
2016-09-19use of std::vector for unitary test instead of CGAL points typevrouvrea
rename unitary test as stands in convention git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1511 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: b768b5a6bb0fe823abe6cbbea28d49c7ecb39a9d
2016-07-01Eigen3 find_package factorizationvrouvrea
CGAL find package in root CMakeLists.txt for Witness complex git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/eigen3_cmake_factorization@1377 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 32137f7687837c63ecfab3a2d11114b27873a1f2
2016-06-10Rename namespaces according to conventioncjamin
+ Missing Boost_THREAD_LIBRARY + Useless typename + Use TBB_LIBRARIES git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/fix_naming@1274 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5c02ec481b62ef52b40d849e76e3d333e2ca4e7c
2016-06-07Rename projects in CMakeLists.txtcjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/fix_naming@1257 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a51e43d795b0c246d0949c7566aa57d3e15925c7
2016-04-06CGAL version requires 4.7 to access CGAL Point_d dimension() functionvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1099 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fe6bb4958f7d98427fb705b7c02b64bddb7e190d
2016-04-06Replace Delaunay_triangulation_off_io.h and ↵vrouvrea
Delaunay_triangulation_off_rw.cpp with Points_off_io.h and CGAL_points_off_reader.cpp Adapt UT and examples for this Adapt Alpha complex for it Alpha complex is now inserting points in a faster way (after a spatial_sort). Remove Alpha complex construction from a pointer on Delaunay triangulation (no more needed). Adapt documentation to all these modifications Forbid copy/move constructor/assignment operator on Alpha complex git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1098 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 08a673b66451b5cb03fbdf482d696d93b35d220f
2016-03-15In Delaunay_triangulation_off_io.h, constructing the Triangulation from a ↵vrouvrea
vector of Points is a more efficient way (instead of inserting points on the fly). As consequence, the documentation needs to be rewritten as the points index are changed. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1046 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: bdb0196b61418a983cfaf7f6781a3a2906e8b136
2016-02-19Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1032 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0e5b89e0ea0d69ebfdb74ba3bbf29518f7ce5ce8
2015-12-11Commit code and doc reviewvrouvrea
Still issue and lot of logs in simplex_tree::prune_above_filtration git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@945 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: cd4f60ddcacb0444e0eb3b9323d8042eb49b132e
2015-11-12code review fixvrouvrea
prune_above_filtration and remove_maximal_simplex in Simplex_tree.h make_filtration_non_decreasing and rec_make_filtration_non_decreasing in Simplex_tree.h git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@910 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a20c9da65a5a3294e42ad2dd45a399d77fb5ad30
2015-11-09Backmerge from trunk.vrouvrea
Alpha complex code review. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@894 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 702c4d667de4e7191d1050e6d855d2f79117f954
2015-10-13Backmerge from trunkvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@853 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 3f1b56bf4986df7bb2938ea2fff944eb9bf9b653
2015-09-01UT fix to compile and run under osXvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@768 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a8351f5bd12a2d5e4869a61c298ddf76ad04f91d
2015-06-25File was not renamed herevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@643 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ea5a10408d8f44eb508ae68cb3ed0699dc4eba93
2015-06-25Modification for doxygen to be generated from user version (to fix bad path ↵vrouvrea
in doc) git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@642 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 68362c2ab9d83a8daa31bcb9d7799216c8ccf94c
2015-06-19Alpha complex documetation - 1st partvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@630 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: b64e860b0fb6d60e706784605f699349ea17a869
2015-06-18From trunk, cpplint was removedvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@626 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 404ea81f038969fb4d96945cfb9856b8ee4ac12a
2015-06-18Moved alphashapedoc.off in data/pointsvrouvrea
Moved Delaunay triangulation OFF files read and write in src/common Delaunay triangulation OFF files read and write documentation, examples and tests git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@623 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: e03902736a79436e97dbf77a88504f3faa8bd9c6
generated by cgit v1.2.3 (git 2.39.1) at 2024-06-20 11:22:00 +0000