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2019-11-29Fix various links for sphinxMarc Glisse
and some minor doc changes along the way. (why were we documenting a hasse diagram that doesn't exist?)
2019-11-28Merge pull request #160 from VincentRouvreau/persistence_graphical_tool_fixVincent Rouvreau
Persistence graphical tool fix
2019-11-27Fix #150 axes has no attribute colorbarROUVREAU Vincent
2019-11-26Merge pull request #147 from mglisse/sktda-tweaks-glisseMarc Glisse
Minor tweaks to representations
2019-11-22Fix link to bottleneck_distance.Marc Glisse
2019-11-21Generalize Clamping to min and maxMarc Glisse
Fix #146.
2019-11-20More tweaks in representationsMarc Glisse
wording for the case where CGAL is missing comparing pointers is sufficient to detect if we are doing fit_transform epsilon is an additive error for bottleneck, so it is unsafe to use 1e-3 or 1e-4 as default
2019-11-20Minor tweaks to representationsMarc Glisse
uniform -> even matmul -> indexing min+max -> clip
2019-11-20Use matplotlib axes to be able to subplot persistence graphical toolsROUVREAU Vincent
2019-11-20Merge branch 'master' into persistence_graphical_tool_improvementsROUVREAU Vincent
2019-11-19Merge pull request #71 from MathieuCarriere/sklearn_tdaVincent Rouvreau
sklearn-tda
2019-11-19Add warning in the doc of assign_filtrationMarc Glisse
Apparently some users expect that it will magically "fix" other simplices so it remains a valid filtration.
2019-11-18Make the license a comment instead of a stringMarc Glisse
I think this interacts better with sphinx automodule
2019-11-16More 'is' to '=='Marc Glisse
2019-11-15The big rename: sktda -> representationsMarc Glisse
2019-11-14Attributes -> Parameters in __init__Marc Glisse
2019-11-14Syntax of return type in docstringMarc Glisse
2019-11-14Remove mentions of the exact sliced Wasserstein (not implemented)Marc Glisse
2019-11-14Make the license a comment instead of a docstringMarc Glisse
We don't want it in the autogenerated sphinx doc
2019-11-09added copyrightsmathieu
2019-11-09Replace 'is' with == or similar.Marc Glisse
Related to issue #113, but I did not touch persistence_graphical_tools.py which is handled in PR #119. I don't know if I got them all, I guess we'll start seeing the warnings with python-3.8 soon enough.
2019-11-08Merge remote-tracking branch 'origin/master' into sklearn_tdaMarc Glisse
2019-11-07Merge pull request #130 from mglisse/align-docVincent Rouvreau
Fix documentation indentation
2019-11-06Update comment for GUDHI_PYTHON_MODULES_EXTRAMarc Glisse
2019-11-05Fix documentation indentationMarc Glisse
2019-11-05Create GUDHI_PYTHON_MODULES_EXTRA without auto-importMarc Glisse
Put Wasserstein in it.
2019-11-04fixes to Marc's commentsMathieuCarriere
2019-11-04fixed typosMathieuCarriere
2019-11-04fixes of Marc's commentsMathieuCarriere
2019-10-31Increase numItermax in the call to POT.Marc Glisse
This number is pretty arbitrary...
2019-10-24Fix issues #113 (replace 'is not' with '!=') and #109 (replace palette with ↵ROUVREAU Vincent
a more visible one)
2019-10-18Update src/python/gudhi/wasserstein.py Théo Lacombe
typo correction Co-Authored-By: Marc Glisse <marc.glisse@inria.fr>
2019-10-18Update src/python/gudhi/wasserstein.pyThéo Lacombe
Co-Authored-By: Marc Glisse <marc.glisse@inria.fr>
2019-10-17Few improvements to the documentation.tlacombe
2019-10-17updated wasserstein doc to be sphinx-compatible + correction of typo in the .rsttlacombe
2019-09-23updated pot install instructions, including condatlacombe
2019-09-23updated wasserstein.py ; added _ in front of private functions, added ↵tlacombe
q=np.inf, added emptydiagram management.
2019-09-23wasserstein distance added on forktlacombe
2019-09-11fixed error in DiagramScalermathieu
2019-09-10Merge remote-tracking branch 'upstream/master' into sklearn_tdaROUVREAU Vincent
2019-09-10Move cython directory stuff to python directory. Make example work. Fix ↵ROUVREAU Vincent
CMake for sktda. Make sktda a submodule of gudhi package.
2019-09-10Rename private variables as some of them are reservedROUVREAU Vincent
2019-09-09Code review: rename cython as python (make target and directoryROUVREAU Vincent