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2020-05-04Merge pull request #205 from MathieuCarriere/wasserstein_representationsVincent Rouvreau
Integration of Wasserstein distances in representations module
2020-04-30Merge pull request #285 from mglisse/wass-autodiffMarc Glisse
Automatic differentiation for Wasserstein distance
2020-04-29small modifsMathieuCarriere
2020-04-29Merge branch 'master' of https://github.com/GUDHI/gudhi-devel into ↵MathieuCarriere
wasserstein_representations
2020-04-29Merge remote-tracking branch 'origin/master' into gen2Marc Glisse
2020-04-28added call methods + other fixesMathieuCarriere
2020-04-28fix conflictMathieuCarriere
2020-04-23Merge remote-tracking branch 'origin/master' into compute_persistenceMarc Glisse
2020-04-23Fix pasto in the docMarc Glisse
2020-04-22Document incompatibility of matching=True and enable_autodiffMarc Glisse
2020-04-22Merge remote-tracking branch 'origin/master' into wass-autodiffMarc Glisse
2020-04-22Clarify the doc of enable_autodiffMarc Glisse
2020-04-22Rename local variablesMarc Glisse
2020-04-22Document several optional dependencies of knnMarc Glisse
2020-04-20Drop one commentMarc Glisse
2020-04-20Merge remote-tracking branch 'origin/master' into wass-autodiffMarc Glisse
2020-04-20Merge pull request #265 from mglisse/dtmMarc Glisse
DTM
2020-04-20Reintroduce _proj_on_diag, with a unit testMarc Glisse
2020-04-20Add __license__Marc Glisse
2020-04-19Unwrap the resultMarc Glisse
2020-04-18enable_autodiff for POT wasserstein_distanceMarc Glisse
2020-04-17Simplify distance-to-diagonal in WassersteinMarc Glisse
2020-04-17Merge remote-tracking branch 'origin/master' into filtrationMarc Glisse
2020-04-14Merge remote-tracking branch 'origin/master' into dtmMarc Glisse
2020-04-14Doc improvementsMarc Glisse
2020-04-13Tweak to detect fit_transformMarc Glisse
2020-04-13Remove left-over codeMarc Glisse
eagerpy is only used with enable_autodiff
2020-04-13Generalize enable_autodiff to more implementationsMarc Glisse
Still limited to L^p
2020-04-13Fix NaN gradient with pytorchMarc Glisse
2020-04-13Small autodiff tweaksMarc Glisse
2020-04-13enable_autodiff with keopsMarc Glisse
This doesn't seem like the best way to handle it, we may want to handle it like a wrapper that gets the indices from knn (whatever backend) and then computes the distances.
2020-04-12Parallelize the "precomputed" case of knnMarc Glisse
It is supposed to be possible to compile numpy with openmp, but it looks like it isn't done in any of the usual packages. It may be possible to refactor that code so there is less redundancy.
2020-04-11Use longer namesMarc Glisse
2020-04-06Remove trailing whitespaceMarc Glisse
2020-04-06compute_persistence for cubicalMarc Glisse
2020-04-05Proper exception in write_output_diagramMarc Glisse
2020-04-05compute_persistence in pythonMarc Glisse
Also simplify references, and replace print with assert for errors
2020-04-03Simplify some codeMarc Glisse
2020-04-03Split compute_persistence from get_persistence.Marc Glisse
2020-04-03removed the print of energy in verbose mode, added by errortlacombe
2020-04-01improved doc, adding double quot for inittlacombe
2020-04-01improved doc readabilitytlacombe
2020-03-31created wasserstein repotlacombe
2020-03-31changed import to import gudhi.barycenter as barycentertlacombe
2020-03-31merged mastertlacombe
2020-03-31changed into import .barycenter for local import in wasserstein, and ↵tlacombe
modified index to remove barycenter doc
2020-03-31removed unused importtlacombe
2020-03-31added import barycenter on top of the file so that we can call for ↵tlacombe
gudhi.wasserstein.barycenter
2020-03-30Streamline initialize_filtrationMarc Glisse
2020-03-30Merge pull request #215 from MathieuCarriere/extended_persistenceMarc Glisse
Extended persistence
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