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2020-05-21periodic fix and adds corresponding unitary tests for bug fixROUVREAU Vincent
2020-05-20Merge branch 'master' of https://github.com/GUDHI/gudhi-develMathieuCarriere
2020-05-20Merge pull request #313 from mglisse/dtmdensityMarc Glisse
DTM density estimator
2020-05-20fix bugMathieuCarriere
2020-05-19long lineMarc Glisse
2020-05-18Infer k when we pass the distances to the nearest neighborsMarc Glisse
2020-05-17One more nogil in cubicalMarc Glisse
2020-05-16nogil for cubical constructorMarc Glisse
There may be some extra copying until cython3, but it is probably not that bad.
2020-05-16Minimal nogil support for cubical complexesMarc Glisse
2020-05-15Merge pull request #295 from yuichi-ike/weighted_ripsVincent Rouvreau
Weighted rips
2020-05-15Merge pull request #204 from MathieuCarriere/generatorsVincent Rouvreau
Generators
2020-05-13Trailing whitespaceMarc Glisse
2020-05-13compute_persistenceMarc Glisse
2020-05-12Merge remote-tracking branch 'origin/master' into dtmdensityMarc Glisse
2020-05-12More testMarc Glisse
2020-05-12test + reformatMarc Glisse
2020-05-12comment modifiedyuichi-ike
2020-05-12reference and comments addedyuichi-ike
2020-05-11Merge pull request #304 from mglisse/nogil1Marc Glisse
Add some nogil for cython
2020-05-11move noteMarc Glisse
2020-05-11Handle k=1 in KNearestNeighbors with SciPyMarc Glisse
2020-05-11Normalize the density if askedMarc Glisse
2020-05-11Reformat docMarc Glisse
2020-05-11Merge remote-tracking branch 'origin/master' into dtmdensityMarc Glisse
2020-05-11Merge branch 'master' into improve_dependencies_documentation2ROUVREAU Vincent
2020-05-11Double underscore is not the correct syntaxROUVREAU Vincent
2020-05-11Merge pull request #294 from VincentRouvreau/fix_sphinx_warningsVincent Rouvreau
Fix sphinx warnings
2020-05-11Fixed by @tlacombeVincent Rouvreau
Co-authored-by: Théo Lacombe <lacombe1993@gmail.com>
2020-05-11Fixed by @tlacombeVincent Rouvreau
Co-authored-by: Théo Lacombe <lacombe1993@gmail.com>
2020-05-11Fix #299ROUVREAU Vincent
2020-05-11document and comments added, weights modifiedyuichi-ike
2020-05-09Merge remote-tracking branch 'origin/master' into nogil1Marc Glisse
2020-05-09Merge pull request #308 from mglisse/bottlepy2Marc Glisse
Bottleneck pybind11 interface
2020-05-07Warn for initialize_filtrationMarc Glisse
2020-05-07Merge remote-tracking branch 'origin/master' into bottlepy2Marc Glisse
2020-05-07Merge pull request #302 from mglisse/hera-gilMarc Glisse
Fewer copies and no GIL for hera
2020-05-07docMarc Glisse
2020-05-06Reimplement the bottleneck python wrapper with pybind11Marc Glisse
2020-05-06Refactor the numpy -> C++ range conversionMarc Glisse
If we want to reuse it for bottleneck...
2020-05-06Avoid reading outside of allocated regionMarc Glisse
The result was unused, but better be safe.
2020-05-05fix use of threads and n_jobs in ParallelMarc Glisse
2020-05-04Add some nogil for cythonMarc Glisse
2020-05-04Merge pull request #205 from MathieuCarriere/wasserstein_representationsVincent Rouvreau
Integration of Wasserstein distances in representations module
2020-05-03Fewer copies and no GIL for heraMarc Glisse
Now the input arrays are not copied as long as they use a float64 data type, even if they are not contiguous. That's not important here, but I wanted an example of how to do it. More importantly, no need to hold the GIL. I was too lazy to benchmark to see if that changed anything...
2020-04-30Merge pull request #285 from mglisse/wass-autodiffMarc Glisse
Automatic differentiation for Wasserstein distance
2020-04-29small modifsMathieuCarriere
2020-04-29small modifsMathieuCarriere
2020-04-29Merge remote-tracking branch 'origin/master' into dtmdensityMarc Glisse
2020-04-29fix conflictMathieuCarriere
2020-04-29Merge branch 'master' of https://github.com/GUDHI/gudhi-devel into ↵MathieuCarriere
wasserstein_representations
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