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2021-11-06Merge pull request #538 from ↵Vincent Rouvreau
VincentRouvreau/empty_diagram_management_for_representations Empty diagram management for representations
2021-11-05code review: try/except in function and assert on length of diagrams for ↵Vincent Rouvreau
error menagement
2021-11-05code review: factorize sample range computationVincent Rouvreau
2021-11-04code review: use len instead of .shape[0]Vincent Rouvreau
2021-11-04code review: try-except inside the ifVincent Rouvreau
2021-11-02Merge pull request #525 from Hind-M/knn_dtm_overflowVincent Rouvreau
Warn about overflow/nan in knn
2021-11-02Merge pull request #490 from Hind-M/generate_points_torus_pythonVincent Rouvreau
First version of points generation on torus
2021-11-02Apply MG's suggestionVincent Rouvreau
2021-10-27Replace itertools in grid torus generation function with something faster in ↵Hind-M
most general use cases
2021-10-26Add comments and some minor changes following code reviewHind-M
2021-10-25Revert "Add warnings in dtm.py for DistanceToMeasure and DTMDensity"Hind-M
This reverts commit f461f050ee8bad509814b4851ab7ae8f43502962.
2021-10-22Fix exception management when sklearn version < 1.0Vincent Rouvreau
2021-10-20Make Entropy work and also fix a bug in the loopVincent Rouvreau
2021-10-18First part of the fixVincent Rouvreau
2021-10-08Add warnings in dtm.py for DistanceToMeasure and DTMDensityHind-M
Add DTMDensity warning test
2021-10-07Move warnings import to the beginning of knn.py fileHind-M
Use isfinite instead of isinf and isnan Use catch_warnings context manager instead of "always" with simplefilter
2021-09-22Rename function of torus cpp version and import it with sphere in pointsHind-M
Change documentation accordingly
2021-09-08Set the warning filter to "always"Hind-M
Add test for dtm overflow warning
2021-08-30Fix dtm and knn failing testsHind-M
2021-08-27Fix issue #314Hind-M
Add overflow and nan warnings in knn when using torch and hnswlib
2021-08-11Add test for sphere and torusHind-M
Fix numerical approximations inconsistencies with dim fraction exponent when generating points as grid on torus Add notes in doc regarding the torus versions use cases
2021-07-27Remove unnecessary checks for primalityHind-M
Document homology_coeff_field values in cubical
2021-07-12Limit homology_coeff_field value to max allowedHind-M
Add test with first prime outside the allowed range
2021-07-01Move primality test to Field_Zp::initHind-M
Throw exception when not prime Add tests
2021-06-07Replace 'uniform' flag of torus generation with 'sample' taking two possible ↵Hind-M
values: 'grid'(i.e uniform==True) or 'random' (i.e uniform==False)
2021-06-01Add datasets generators documentationHind-M
2021-05-28Merge remote-tracking branch 'upstream/master' into generate_points_torus_pythonHind-M
2021-05-28Merge pull request #481 from Hind-M/generate_points_sphere_pythonVincent Rouvreau
Add random points generator on sphere in python, with an example
2021-05-28Merge pull request #365 from tlacombe/essential_part_in_wassersteinVincent Rouvreau
Essential part in wasserstein
2021-05-27Add documentation to python torus fonction and apply some modifications ↵Hind-M
according to PR comments
2021-05-26Change some output messages and documentation to me more explicitHind-M
2021-05-10Rename dim to ambient_dim for sphere (to be consistent with dim in torus)Hind Montassif
2021-05-10Add __init__.py files at every module levelHind Montassif
Standardize functions to match the existing ones in sphere
2021-05-07Replace num_points with n_samples to be consistent with sphereHind Montassif
2021-05-07Use PI constant from numpy instead of mathHind Montassif
Modify grid points generation incorrect formula
2021-05-05Add __init__ files at every level in modulesHind Montassif
Remove last modules level and add sample type argument Rename num_points to n_samples
2021-05-04Set Simplex_tree_interface_full_featured constructor name (Simplex_tree) to ↵Hind Montassif
the class name
2021-04-30First version of points generation on torusHind Montassif
2021-04-28Add points (dataset type) before the underlying model (sphere) as a moduleHind
2021-04-28enhancing the doc2tlacombe
2021-04-28enhancing the doctlacombe
2021-04-27Rename and reorganize point generators moduleHind
2021-04-27changed infty to inf in doctlacombe
2021-04-27now consider (inf,inf) as belonging to the diagonal ; more teststlacombe
2021-04-27Merge branch 'essential_part_in_wasserstein' of ↵tlacombe
https://github.com/tlacombe/gudhi-devel into essential_part_in_wasserstein merging typo correction
2021-04-27Typo - Update src/python/gudhi/wasserstein/wasserstein.pyThéo Lacombe
Co-authored-by: Vincent Rouvreau <10407034+VincentRouvreau@users.noreply.github.com>
2021-04-27Typo correction - Update src/python/gudhi/wasserstein/wasserstein.pyThéo Lacombe
Co-authored-by: Vincent Rouvreau <10407034+VincentRouvreau@users.noreply.github.com>
2021-04-26Replace assert with GUDHI_CHECKHind
Make the function non-template Change typing and casting
2021-04-23Make adjustments according to the received reviewsHind
2021-04-22Add random points generator on sphere in python, with an exampleHind