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2022-01-26merge master and resolve conflictVincent Rouvreau
2022-01-19Merge masterVincent Rouvreau
2021-11-24Make the new BettiCurve class compatible with the old interfaceHind-M
2021-11-22Merge remote-tracking branch 'upstream/master' into gspr/exact-betti-curveHind-M
2021-11-15Remove irrelevant q in test_dtm_overflow_warningsHind-M
2021-11-15Keep dtm warnings test for "hnsw"Hind-M
2021-11-15Disable test of dtm warnings until next version of pykeops is released (cf. ↵Hind-M
issue #543)
2021-11-08Merge master and resolve conflicts (mainly src/python/CMakeLists.txt)Vincent Rouvreau
2021-11-06Merge pull request #538 from ↵Vincent Rouvreau
VincentRouvreau/empty_diagram_management_for_representations Empty diagram management for representations
2021-11-02Merge pull request #525 from Hind-M/knn_dtm_overflowVincent Rouvreau
Warn about overflow/nan in knn
2021-10-27Add test to check outputs of the two torus implementationsHind-M
2021-10-26Add comments and some minor changes following code reviewHind-M
2021-10-25Revert "Add warnings in dtm.py for DistanceToMeasure and DTMDensity"Hind-M
This reverts commit f461f050ee8bad509814b4851ab7ae8f43502962.
2021-10-21Factorize cpp and python torus tests implementationsHind-M
2021-10-20Add simplex tree test for persistence_intervals_in_dimensionVincent Rouvreau
2021-10-20Improve tests for empty representationsVincent Rouvreau
2021-10-19Add empty diags testsVincent Rouvreau
2021-10-18First part of the fixVincent Rouvreau
2021-10-08Add warnings in dtm.py for DistanceToMeasure and DTMDensityHind-M
Add DTMDensity warning test
2021-09-22Rename function of torus cpp version and import it with sphere in pointsHind-M
Change documentation accordingly
2021-09-08Set the warning filter to "always"Hind-M
Add test for dtm overflow warning
2021-08-11Add test for sphere and torusHind-M
Fix numerical approximations inconsistencies with dim fraction exponent when generating points as grid on torus Add notes in doc regarding the torus versions use cases
2021-07-01Revert AlphaComplex3D. To be done with periodicROUVREAU Vincent
2021-06-22Add exception when input points not in 3dROUVREAU Vincent
2021-06-22Fix #448. Add Alpha complex 3d python module unitary tests accordingly.ROUVREAU Vincent
2021-06-21rename test as it is only for weightedROUVREAU Vincent
2021-06-09Merge branch 'master' into python_weighted_alpha_complexVincent Rouvreau
2021-06-04Actually update test namesGard Spreemann
Fixes incomplete commit cb01ba2a8fa4aba9dc27b9dc62eaaf492150cad0
2021-05-28Merge pull request #365 from tlacombe/essential_part_in_wassersteinVincent Rouvreau
Essential part in wasserstein
2021-05-25Add a separator argument that goes with the ↵Hind-M
rips_complex_diagram_persistence_from_distance_matrix_file_example input file Specify explicitly the separator when using a specific input file
2021-04-30Update tests to reflect removal of old Betti curve classGard Spreemann
2021-04-28Handle an empty list of persistence diagramsGard Spreemann
2021-04-27now consider (inf,inf) as belonging to the diagonal ; more teststlacombe
2021-04-24Merge pull request #476 from mglisse/farMarc Glisse
Sparse Rips and choose_n_farthest_points, fix #456
2021-04-22Merge branch 'master' into python_weighted_alpha_complexROUVREAU Vincent
2021-04-20update doc and teststlacombe
2021-04-17Safely drop some vertices in sparse RipsMarc Glisse
2021-04-17Sparse Rips: disable `mini`, optimize a bit redundant pointsMarc Glisse
2021-04-15Compare lists with ==Marc Glisse
numpy/core/_asarray.py:102: VisibleDeprecationWarning: Creating an ndarray from ragged nested sequences (which is a list-or-tuple of lists-or-tuples-or ndarrays with different lengths or shapes) is deprecated. If you meant to do this, you must specify 'dtype=object' when creating the ndarray.
2021-04-12handle essential parts testtlacombe
2021-04-12removed test_wasserstein_distance_grad to be consistent with mastertlacombe
2021-04-12change name _offdiag to _finite_part in test filetlacombe
2021-04-12merge upstream/master into essential partstlacombe
2021-03-25Move simplex tree equality operator in another branchROUVREAU Vincent
2021-03-24Remove read_weights and depreciate off_fileROUVREAU Vincent
2021-03-23Add simplex tree equality operator to be able to test alpha complexROUVREAU Vincent
2021-03-15Add read_weights in reader_utils. Add exceptions for file not found and ↵ROUVREAU Vincent
inconsistency in alpha ctor. Add UT accordingly
2021-03-12review constructor and test with one point and without pointsROUVREAU Vincent
2021-02-28Don't wait for end of tests to assert successGard Spreemann
2021-02-28Update testGard Spreemann
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