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2022-02-14Remove shallow copyVincent Rouvreau
2022-02-11__copy__, __deepcopy__, copy, and copy ctors. Still pb with the docVincent Rouvreau
2022-02-11Merge branch 'master' into stree_copy_pythonVincent Rouvreau
2022-02-10Add SimplexTree copy method and its testVincent Rouvreau
2022-02-10Boost 1.66.0 is now the minimal version as required from cgal 5.1 - Also ↵Vincent Rouvreau
remove useless include boost/version.h
2022-01-26Code review: Remove empty_point_set_ that can be deduced from num_vertices ↵Vincent Rouvreau
(new method in Alpha_complex -> Abstract_alpha_complex -> In/Exact_alpha_complex_dD -> Alpha_complex_interface
2022-01-26merge master and resolve conflictVincent Rouvreau
2022-01-21Merge pull request #548 from Hind-M/gspr/exact-betti-curveVincent Rouvreau
Gspr/exact betti curve
2022-01-20Rollback c1cf7fe and 5c09f30Vincent Rouvreau
2022-01-19Code review: exact_version was useless in Inexact_alpha_complex_dDVincent Rouvreau
2022-01-19Code review: update doc as well for c1cf7fe3Vincent Rouvreau
2022-01-19Code review: None was used to detect unweighted alpha complex. An empty list ↵Vincent Rouvreau
works as well and simplifies the code
2022-01-19Doc review: reword confusing sentenceVincent Rouvreau
2022-01-19Merge masterVincent Rouvreau
2022-01-18Fix BettiCurve doc in source codeHind-M
2022-01-04Merge pull request #556 from Hind-M/python_tests_debugVincent Rouvreau
Fix failing tests in debug mode
2021-12-17Use vs 2019 for appveyor as well as python 3.9 (#534)Vincent Rouvreau
* Visual studio 2019 (instead of 2017) * Let vcpkg install cgal manage its dependencies (boost, mpfr and gmp) * vcpkg install tbb also * need to vcpkg integrate install * pip installations are no more in --user mode * Modify all / to \ for windows pths * Compile python module --inplace, and copy required dll inside gudhi directory (add dll path to windows PATH is not enough) * Cmake add_GUDHI_PYTHON_lib_dir was not multi-path proof (happens in windows with release_path;debug_path mechanism) * With CGAL >= 5.3.0, CGAL_HEADER_ONLY CMake variable is no more set as it is the default mode * GUDHI_PYTHON_PATH_ENV Cmake variable requires ; as path separator on windows, and : otherwise
2021-12-15Fix failing tests in debug modeHind-M
2021-12-07Merge pull request #544 from Hind-M/torus_warningsVincent Rouvreau
Remove sphinx warnings for torus
2021-12-03Indent properly the docstringHind-M
Remove redundant return type
2021-11-24Make the new BettiCurve class compatible with the old interfaceHind-M
2021-11-22Merge remote-tracking branch 'upstream/master' into gspr/exact-betti-curveHind-M
2021-11-15Remove irrelevant q in test_dtm_overflow_warningsHind-M
2021-11-15Keep dtm warnings test for "hnsw"Hind-M
2021-11-15Disable test of dtm warnings until next version of pykeops is released (cf. ↵Hind-M
issue #543)
2021-11-09Remove sphinx warnings for torusHind-M
2021-11-08Missed this oneVincent Rouvreau
2021-11-08Merge master and resolve conflicts (mainly src/python/CMakeLists.txt)Vincent Rouvreau
2021-11-08code review: factorization - Point_cgal_to_cython weighted version calls ↵Vincent Rouvreau
unweighted version
2021-11-08code review: read_points_from_off_file already throws an exception when off ↵Vincent Rouvreau
file does not exist
2021-11-08doc review: regular triangulation is not 'of Delaunay'Vincent Rouvreau
2021-11-06Merge pull request #538 from ↵Vincent Rouvreau
VincentRouvreau/empty_diagram_management_for_representations Empty diagram management for representations
2021-11-05code review: try/except in function and assert on length of diagrams for ↵Vincent Rouvreau
error menagement
2021-11-05code review: factorize sample range computationVincent Rouvreau
2021-11-04code review: use len instead of .shape[0]Vincent Rouvreau
2021-11-04code review: try-except inside the ifVincent Rouvreau
2021-11-03Merge pull request #529 from ↵Vincent Rouvreau
VincentRouvreau/moderate_alpha_complex_make_filtration_non_decreasing make_filtration_non_decreasing no more always called
2021-11-03Merge pull request #541 from VincentRouvreau/no_more_inria_gforgeVincent Rouvreau
No more gforge references
2021-11-02No more gforge referencesVincent Rouvreau
2021-11-02Merge pull request #525 from Hind-M/knn_dtm_overflowVincent Rouvreau
Warn about overflow/nan in knn
2021-11-02Merge pull request #490 from Hind-M/generate_points_torus_pythonVincent Rouvreau
First version of points generation on torus
2021-11-02Apply MG's suggestionVincent Rouvreau
2021-11-02Precise the torus is flatVincent Rouvreau
Co-authored-by: Marc Glisse <marc.glisse@inria.fr>
2021-10-27Add test to check outputs of the two torus implementationsHind-M
2021-10-27Replace itertools in grid torus generation function with something faster in ↵Hind-M
most general use cases
2021-10-26Add comments and some minor changes following code reviewHind-M
2021-10-25Merge branch 'knn_dtm_overflow' of https://github.com/Hind-M/gudhi-devel ↵Hind-M
into knn_dtm_overflow
2021-10-25Revert "Add warnings in dtm.py for DistanceToMeasure and DTMDensity"Hind-M
This reverts commit f461f050ee8bad509814b4851ab7ae8f43502962.
2021-10-25Revert "Add torch dependency for some python tests"Hind-M
This reverts commit 44659b4d5c2df18745e36280317ecbc9c6a5b411.
2021-10-22Fix exception management when sklearn version < 1.0Vincent Rouvreau
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