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2020-06-18Code review: rename Flag_complex_sparse_matrix as edge_collapser and ↵ROUVREAU Vincent
filtered_edge_collapse method as process_edges
2020-06-17Map *internal* edges to their indexMarc Glisse
2020-06-17Let insert_vertex return some infoMarc Glisse
2020-06-17Expand the matrix dynamically when inserting new verticesMarc Glisse
2020-06-17Split Row_index into IVertex and Edge_indexMarc Glisse
We can always choose other names, the main goal was being able to identify what is what from the name.
2020-06-16Merge branch 'master' into edge_collapse_integration_vincentROUVREAU Vincent
2020-06-15Add image for edge collapseROUVREAU Vincent
2020-06-12Mention pip packageMarc Glisse
2020-06-12Merge pull request #335 from VincentRouvreau/gudhi_pip_packageVincent Rouvreau
gudhi pip package for version 3.2.0
2020-06-11Make some neighborhoods openMarc Glisse
2020-06-11Upload dlls from gudhi directoryROUVREAU Vincent
2020-06-11Replace SparseMatrix with vector<SparseVector>Marc Glisse
This makes insertions much faster
2020-06-11Store edge indices instead of unused filtration value, in the matrixMarc Glisse
2020-06-11Make u_set_dominated_edges_ implicitMarc Glisse
2020-06-11Remove unused u_set_removed_edges_Marc Glisse
2020-06-11cannot import WinDLL from ctypes on non-windows systemsROUVREAU Vincent
2020-06-11Add distributor the right to add dll to the packageROUVREAU Vincent
2020-06-09Merge pull request #337 from mglisse/herabMarc Glisse
Interface for hera's bottleneck_distance
2020-06-09move cython from install_requires to setup_requiresROUVREAU Vincent
2020-06-06Merge pull request #326 from VincentRouvreau/alpha_complex_python_fast_and_exactVincent Rouvreau
Alpha complex python enhancement
2020-06-05author, etcMarc Glisse
2020-06-05code review: exact version was not correctROUVREAU Vincent
2020-06-05Doc changes after Vincent's reviewMarc Glisse
2020-06-05Merge pull request #344 from mglisse/bottlenoneMarc Glisse
Support e=None for bottleneck_distance
2020-06-05Doc tweak by VincentMarc Glisse
2020-06-05code review: rename complexity with precisionROUVREAU Vincent
2020-06-05code review: rename ph as pointROUVREAU Vincent
2020-06-05Code review: 'fast' class attribute was not necessary and redundant with C++ ↵ROUVREAU Vincent
class attribute
2020-06-05Code review: no link to CGAL::Lazy_exact_nt and no guarantee on fast precisionROUVREAU Vincent
2020-06-05Code review: type is floatROUVREAU Vincent
2020-06-05Update src/python/gudhi/alpha_complex.pyxVincent Rouvreau
Co-authored-by: Marc Glisse <marc.glisse@inria.fr>
2020-06-04rollback 85dc5c1 as the information is not quite the same in both structureROUVREAU Vincent
2020-06-04code review: better use a for loopROUVREAU Vincent
2020-06-04code review: remove u_set_dominated_edges_ as it is redundant with ↵ROUVREAU Vincent
critical_edge_indicator_
2020-06-04Use ssize_t from pybind11Marc Glisse
2020-06-04Fix warningsROUVREAU Vincent
2020-06-04code review: no need to loop backwardROUVREAU Vincent
2020-06-04user_version: don't copy hera if an external version is specifiedMarc Glisse
2020-06-04Workaround for ssize_t on windowsMarc Glisse
2020-06-04Fix tests and utilsROUVREAU Vincent
2020-06-04Revert "Try to add inf values"ROUVREAU Vincent
This reverts commit 8e3e8efcb0c9a3e5650545ee0d9756129b10a95c.
2020-06-04Try to add inf valuesROUVREAU Vincent
2020-06-04Merge pull request #345 from VincentRouvreau/fix_sphinx_warningVincent Rouvreau
Fix sphinx warning and link inside the rips sphinx doc
2020-06-04Remove useless tracesROUVREAU Vincent
2020-06-03Merge pull request #338 from mglisse/parrepMarc Glisse
Parallelism in pairwise_distances
2020-06-03Add an example that tests the persistence is conserved when using edge ↵ROUVREAU Vincent
collapse, versus a classical rips
2020-06-03Mention Joblib in installation docMarc Glisse
2020-06-03doc review: use :class: to link to the ref manual, rollback link to the user ↵ROUVREAU Vincent
manual
2020-06-02code review: GUDHI_CHECK if u==v oninsert_edge methodROUVREAU Vincent
2020-06-02code review: Remove the clear as this function won't be called several timesROUVREAU Vincent
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