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2022-05-19Merge pull request #610 from albert-github/feature/bug_docu_returnVincent Rouvreau
Documentation: Warning about return statement
2022-05-19Documentation: Doxygen warningsalbert-github
Based on review corrected `EXAMPLE_PATH` and `CITE_BIB_FILES`.
2022-05-18Documentation: Warning about return statementalbert-github
When running doxygen over the sources we get the warnings like: ``` .../gudhi-devel/src/Skeleton_blocker/include/gudhi/Skeleton_blocker_complex.h:1073: warning: found documented return type for Gudhi::skeleton_blocker::Skeleton_blocker_complex::remove_popable_blockers that does not return anything ``` The functions are `void` functions so should not have a return value.
2022-05-18Documentation: Doxygen warningsalbert-github
When running doxygen on the sources we get (a.o.) the following warnings: ``` .../gudhi-devel/src/Contraction/include/gudhi/Edge_contraction.h:214: warning: unbalanced grouping commands .../gudhi-devel/src/common/doc/examples.h:3: warning: the name 'Examples' supplied as the argument in the \file statement is not an input file error: bib file .../gudhi-devel/biblio/how_to_cite_gudhi.bib not found! .../gudhi-devel/src/common/doc/installation.h:271: warning: included file biblio/how_to_cite_gudhi.bib is not found. Check your EXAMPLE_PATH ``` This is corrected in the different files and in the settings in src/Doxyfile.in Also there are a number of settings that are obsolete like: ``` warning: Tag 'LATEX_SOURCE_CODE' at line 1835 of file '.../gudhi-devel/build_windows_fork/Doxyfile' has become obsolete. ``` This is corrected in the src/Doxyfile.in file
2022-05-17code review: test also the list of all oppposite vertices is the simplex ↵Vincent Rouvreau
given as an input
2022-05-17Merge remote-tracking branch 'upstream/master' into fetch_datasetsHind-M
2022-05-17code review: test also range sizeVincent Rouvreau
2022-05-17Missed reference found by VincentMarc Glisse
2022-05-17Merge remote-tracking branch 'origin/master' into collapse-pr2Marc Glisse
2022-05-16code review: use isinstance(x, T) instead of issubclass(type(x),T)Vincent Rouvreau
2022-05-16code review: limit test was not respecting the one described in the ↵Vincent Rouvreau
documentation
2022-05-10Fix limit tests for plot (and warning in test)Vincent Rouvreau
2022-05-09Merge pull request #504 from ↵Vincent Rouvreau
VincentRouvreau/persistence_graphical_tools_improvements Persistence graphical tools improvements
2022-05-06Delete bunny array before removing the fileHind-M
2022-05-05Remove default data home test (because of 'GUDHI_DATA' environment variable ↵Hind-M
option)
2022-05-05Add GUDHI_DATA environment variable optionHind-M
2022-05-04Ask for file_path as parameter of remote fetching functions instead of both ↵Hind-M
dirname and filename Modify remote fetching test
2022-05-02Merge remote-tracking branch 'upstream/master' into fetch_datasetsHind-M
2022-04-29plot_persistence_diagram and plot_persistence_barcode improvementsVincent Rouvreau
2022-04-28Put edge sphere in cacheHind-M
2022-04-27Ultimately, we don't really need to store the min enclosing ball in case itHind-M
contains the extra point, a bool is enough
2022-04-27Remove unnecessary code from cech blockerHind-M
2022-04-26Modify cech docHind-M
Use Filtration_value instead of double for casting Use a templated range of points instead of vector in cech constructor Capitalize sphere_circumradius.h file name and make it private in doc
2022-04-25Use Dimension_tag<2> instead of Dynamic_dimension_tag in ↵Hind-M
cech_complex_example_from_points.cpp
2022-04-25Remove cech_complex_step_by_step example and MiniballHind-M
2022-04-25Remove proximity_graph computation benchmarkHind-M
Add Dynamic_dimension_tag case
2022-04-22Merge branch 'master' into stree_iterator_boundary_and_opposite_vertexVincent Rouvreau
2022-04-22Merge branch 'master' into simplex_tree_extended_persistence_enhancementVincent Rouvreau
2022-04-21Make Windows compilation fails on error (#598)Vincent Rouvreau
Use '-DEIGEN_DEFAULT_DENSE_INDEX_TYPE=int' as a workaround
2022-04-12doc review: accordingly to the review, replace the other places where it was ↵Vincent Rouvreau
also not well explained
2022-04-12code review: Add short cut for contiguous vertices incrementVincent Rouvreau
2022-04-12code review: remove unnecessary test of empty suffix_Vincent Rouvreau
2022-04-12identationVincent Rouvreau
2022-04-12doc review: i is from d to 0Vincent Rouvreau
2022-04-12doc reviewVincent Rouvreau
Co-authored-by: Marc Glisse <marc.glisse@inria.fr>
2022-04-12doc reviewVincent Rouvreau
Co-authored-by: Marc Glisse <marc.glisse@inria.fr>
2022-04-11Merge pull request #596 from ↵Vincent Rouvreau
VincentRouvreau/float_relative_precision_alpha_python Float relative precision alpha python
2022-04-06code review: Rewrite warnings in case of import errorsVincent Rouvreau
2022-04-06Merge remote-tracking branch 'upstream/master' into ↵Vincent Rouvreau
persistence_graphical_tools_improvements
2022-04-05nogil for float_relative_precision methodsVincent Rouvreau
2022-04-05Boundary and its opposite vertex iterator for the simplex treeVincent Rouvreau
2022-03-31code review: no need to nogil for cheap functions. Repeat ↵Vincent Rouvreau
get_float_relative_precision is only for safe mode
2022-03-31Test the featureVincent Rouvreau
2022-03-30Reintroduce parallel_sortMarc Glisse
2022-03-30get/set float_relative_precision and its documentationVincent Rouvreau
2022-03-30Remove this useless lineVincent Rouvreau
2022-03-29Tweak loop to avoid uninitialized variableMarc Glisse
2022-03-29long linesMarc Glisse
2022-03-28doc review: add a warning about phantom simplices for blocker_funcVincent Rouvreau
2022-03-28doc review: remove segfault note as it is no more the caseVincent Rouvreau
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