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2021-11-04code review: use len instead of .shape[0]Vincent Rouvreau
2021-11-04code review: try-except inside the ifVincent Rouvreau
2021-11-03Merge pull request #529 from ↵Vincent Rouvreau
VincentRouvreau/moderate_alpha_complex_make_filtration_non_decreasing make_filtration_non_decreasing no more always called
2021-11-03Merge pull request #541 from VincentRouvreau/no_more_inria_gforgeVincent Rouvreau
No more gforge references
2021-11-02No more gforge referencesVincent Rouvreau
2021-11-02Merge pull request #525 from Hind-M/knn_dtm_overflowVincent Rouvreau
Warn about overflow/nan in knn
2021-11-02Merge pull request #490 from Hind-M/generate_points_torus_pythonVincent Rouvreau
First version of points generation on torus
2021-11-02Apply MG's suggestionVincent Rouvreau
2021-11-02Precise the torus is flatVincent Rouvreau
Co-authored-by: Marc Glisse <marc.glisse@inria.fr>
2021-11-02Merge pull request #522 from Hind-M/persistent_cohomologyVincent Rouvreau
Avoid confusion between dim and field of coeffs in persistent cohomology
2021-11-02Merge master and fix conflictsVincent Rouvreau
2021-10-27Add test to check outputs of the two torus implementationsHind-M
2021-10-27Replace itertools in grid torus generation function with something faster in ↵Hind-M
most general use cases
2021-10-26Add comments and some minor changes following code reviewHind-M
2021-10-25Merge branch 'knn_dtm_overflow' of https://github.com/Hind-M/gudhi-devel ↵Hind-M
into knn_dtm_overflow
2021-10-25Revert "Add warnings in dtm.py for DistanceToMeasure and DTMDensity"Hind-M
This reverts commit f461f050ee8bad509814b4851ab7ae8f43502962.
2021-10-25Revert "Add torch dependency for some python tests"Hind-M
This reverts commit 44659b4d5c2df18745e36280317ecbc9c6a5b411.
2021-10-22Fix exception management when sklearn version < 1.0Vincent Rouvreau
2021-10-21Factorize cpp and python torus tests implementationsHind-M
2021-10-20Make Entropy work and also fix a bug in the loopVincent Rouvreau
2021-10-20Add simplex tree test for persistence_intervals_in_dimensionVincent Rouvreau
2021-10-20Improve tests for empty representationsVincent Rouvreau
2021-10-19Add empty diags testsVincent Rouvreau
2021-10-19Make Cech benchmark workHind-M
2021-10-18First part of the fixVincent Rouvreau
2021-10-13Change version of CGAL_WITH_EIGEN3 to 5.0.1 for cech useHind-M
2021-10-12Remove old implementation of Minimal_enclosing_ball_radius operator ()Hind-M
2021-10-11Change the minimal version of CGAL_WITH_EIGEN3 to 5.1.0 for cech use (tests, ↵Hind-M
examples, etc)
2021-10-08Merge branch 'master' into knn_dtm_overflowHind-M
2021-10-08Add torch dependency for some python testsHind-M
2021-10-08Add warnings in dtm.py for DistanceToMeasure and DTMDensityHind-M
Add DTMDensity warning test
2021-10-07Move warnings import to the beginning of knn.py fileHind-M
Use isfinite instead of isinf and isnan Use catch_warnings context manager instead of "always" with simplefilter
2021-10-06Replace CGAL_FOUND flag with version check of CGAL_WITH_EIGEN3_VERSIONHind-M
2021-10-01Separate Minimal_enclosing_ball_radius class which uses CGAL from common ↵Hind-M
distance_functions.h file
2021-09-30Add Cech tests, examples, utilities and benchmark to the build only if CGAL ↵Hind-M
is present
2021-09-30Move minimal enclosing balls cache to Cech_complex.h instead of the blockerHind-M
Modify cech test to be more relevant regarding the current algorithm Do some cleaning
2021-09-22Rename function of torus cpp version and import it with sphere in pointsHind-M
Change documentation accordingly
2021-09-22Remove bunnyVincentRouvreau
2021-09-22Simplex tree example README was not up to date, and bunny can be removedVincentRouvreau
2021-09-22Replace the doc sphere image plotted with trisurf with another using ↵Hind-M
scattered points
2021-09-13make_filtration_non_decreasing no more called in alpha complex dD exact ↵VincentRouvreau
version and exact and safe 3d versions
2021-09-08Set the warning filter to "always"Hind-M
Add test for dtm overflow warning
2021-09-08Change cache so that the index of the stored sphere is used as keyHind-M
2021-09-07Merge pull request #527 from VincentRouvreau/fix_documentation_broken_linksVincent Rouvreau
Fix broken links. Add a tool to generate cpp example page
2021-09-06Remove unnecessary key permutations storage in cacheHind-M
2021-09-06Merge masterVincentRouvreau
2021-09-06Only dD version of Alpha complex for pythonVincentRouvreau
2021-09-06code review: weights is None by default, even for documentationVincentRouvreau
2021-08-31Fix broken links. Add a tool to generate cpp example pageROUVREAU Vincent
2021-08-30Fix dtm and knn failing testsHind-M