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2018-05-10added betti sequencesmcarrier
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3431 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 4680471ce781468c247c40fb5e6eb699dce890c8
2018-05-08git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3422 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a0433f51f7cb1147b4ad59ff1ef05f6b8251ed7a
2018-05-03git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3412 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 612ea7ce6d4d5d743e606f9d7b443e21b25d8034
2018-04-30git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3408 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 6bfd16f3520497204e4bb67e0705ce120af23ec9
2018-04-26Fix Copyrightsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/copyright_clarification_vincent@3400 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ff348beedf92656c6913c2a1df983b5804b33988
2018-04-25renamed landscape and image code to make them fit in Pawel's denominationmcarrier
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3398 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c57a2eb71d848df7bd677a8f3fc803b0c87d2d8d
2018-04-25renamed landscape and image code to make them fit in Pawel's denominationmcarrier
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3397 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ddbd1dc31e12654bf3a9d9aaf67c4dfc482faa03
2018-04-25renamed landscape and image code to make them fit in Pawel's denominationmcarrier
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3396 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5269a65810a1164cb61bcb34d23046e6a48ec355
2018-04-23added unitary tests for kernelsmcarrier
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3391 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d383ed76f3cfd3724449cb7e8c24b895a7322d52
2018-04-23git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3389 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1569e7e9d47af54fe85e736583e53c99f1178439
2018-04-23added weight_functions.hmcarrier
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3388 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 71f741e7ca2fcacc877d44e4d6b633f283526f2f
2018-04-23git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3387 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 3fe2ae4af0c7cadf507fc5148c05dcf664c5e151
2018-04-20git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3386 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 29ea554ecd104927cce84dbc21dab531fc21265c
2018-04-20git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3385 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2a83e62e132ce406986efa1456b5f1bca6b93691
2018-04-12git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3378 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7cd9f2ae7c9da5d525bdb76a00ffac1359a47da7
2018-04-12Add a CMake option in order to use TBB or not. Default is ONvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3375 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fbe41ee9e7771095e34b6c12adbacddf9484f1b1
2018-04-09Fix deprecated CGAL random functionvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3352 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: dcd5eadc420575b1de91acd80328c6026bef7e0a
2018-04-05Merge last modifications of Nerve_GIC branchvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3342 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 268968d6b446db88bdaab48bbdb5c91882d4a820
2018-04-04No need to repeat title, automatically done by the websitevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3338 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 51d295377d2b3235e9316f199bf95d3c5aeaeab3
2018-04-04Fix max issue on MacOS clangvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3337 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 89cd68f9abd58a43553d9ca2d54e776374557f26
2018-04-04Merge sparse rips branch in trunkvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3336 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 01dcab006197637ccba9c29f8990375fe05ad7b4
2018-04-03Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3335 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 41b78dbadb13e3eca889479c1112814b2b58f679
2018-04-03Modify the correct signature to operator== and !=vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3333 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 936c6abcb75e16cc569368e45e87feaa409e0890
2018-04-03Try to fix operator< for std::sort on CentOSvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3332 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: caaeb02c38a8adc8c09321e534f9b73181450acf
2018-04-03Add explicit operator< to fix sort bugvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3331 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d1a70cdbae311f1376e24d61568471d81b7f0df1
2018-04-03Merge rips_complex_from_correlation_matrix branchvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3328 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a0d98d884fc06a6528e3362d6ed627cd964f527a
2018-04-03Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/rips_complex_from_correlation_matrix@3327 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 85b28237989b93fb4b5f8629a7f28bdb51b9a1b1
2018-04-03Add warnings for rips persistence from correlation matrix (points under the ↵vrouvrea
diagonal). Use range instead of vector in write_persistence_intervals_to_stream git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/rips_complex_from_correlation_matrix@3326 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ea0fdc32c91f1927c5a9f2a3864360895ce8128a
2018-03-30git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3323 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 550a4c3f9050b542203ab53ea7ef5ae1c8032f38
2018-03-29added doc + cythonmcarrier
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3319 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: cffc2e28ebf6fae46246c5abaac52b7328adf490
2018-03-29Use add_edge_without_blockers in GudhUI.glisse
When the meaning of add_edge changed, GudhUI was not updated. The old functionality is available as add_edge_without_blockers. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3318 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 58b10f79177736cc99e35fb526e4c987d615ae4c
2018-03-29Use CGAL::NT_converter to convert filtration values.glisse
Alpha_complex may produce something different from what the Simplex_tree expects, convert it explicitly. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3317 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d6c7492bbf48401a9f63f6462c7704e380eff6e1
2018-03-28Merge last Nerve_GIC development from eponym branchvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3311 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c57e5f6f364b6162f607edd07f3a31577e640fcb
2018-03-28Fix header that was not pointing on the correct web site. Cpp documentation ↵vrouvrea
header was not good git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3310 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 520635bb2f09419b4b70f71c0838d45ae15354b3
2018-03-13Simplex_key clarifications in FilteredComplex concept.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3284 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a42ef2c14a64a769c9a8c8ddc37071ba260b17bf
2018-03-12untestedglisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3279 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 327de60f56f1c0baa9dfdcbd4ca86afa43fcc053
2018-03-12git-svn-id: ↵glisse
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3278 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 68262663f0fbeceef2a81929e42799479e7038f8
2018-03-08Web site review after Editorial Boardvrouvrea
Do not need to import gudhi twice in py git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3270 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7d7a4bba27f4cbcad5f8b18cb86587a15e6a8435
2018-03-06git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3269 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 17860628d3250f689152cdf65432c5a61d76f4d2
2018-03-06Merge of branch offreaderfix_vincentvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3267 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 92edf71d87033c53b3a46fbd86d5d8e4e2f0e1b5
2018-03-06Add offline_header.html for Debian package generation that requires ↵vrouvrea
self-contained documentation. Command for generation : ( cat Doxyfile ; echo "HTML_HEADER = doc/common/offline_header.html" ) | doxygen - git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3266 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7bd88e71f56b8c7929cfc8475dd49ff2b0901b53
2018-03-05added files for cythonization of kernelsmcarrier
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3263 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5bc7aadf2696ea2f94384a163451237016a7effb
2018-02-27git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3259 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: eedc1bf47f0194b23dfc02425bedd2682bd3f573
2018-02-16git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3251 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 80f084fc990df6e5c6b60ac83514220aba2ceb5c
2018-02-15integrated kernel code in pers_representation branchmcarrier
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3249 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 58e77263a0da3674e4699cef832b6d357dcf12e2
2018-02-13Add documentation tests for example_vector_double_points_off_readervrouvrea
Fix Marc's comments about reader git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/offreaderfix_vincent@3243 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7dfb928c064c1286c1903cb91600ebace7a8fd47
2018-02-08Fixed comments from Marc and Vincent.pdlotko
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/rips_complex_from_correlation_matrix@3234 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 8b5e08c38cd05512ba8b2824f13a62d35f39bac3
2018-02-08random commit.pdlotko
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/rips_complex_from_correlation_matrix@3233 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 9a3ccdd8a000bd3fd79bab61b35e50bd707cfb29
2018-02-08The file has been removed.pdlotko
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/rips_complex_from_correlation_matrix@3232 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 4e6e6b2c1939506e19bb76a7bb507f869160577b
2018-02-08Commit to remove one file.pdlotko
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/rips_complex_from_correlation_matrix@3231 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5795ef0322c1ba328e8bee068009a27f18b7224c