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2021-11-03Merge pull request #529 from ↵Vincent Rouvreau
VincentRouvreau/moderate_alpha_complex_make_filtration_non_decreasing make_filtration_non_decreasing no more always called
2021-11-03Merge pull request #541 from VincentRouvreau/no_more_inria_gforgeVincent Rouvreau
No more gforge references
2021-11-02No more gforge referencesVincent Rouvreau
2021-11-02Merge pull request #525 from Hind-M/knn_dtm_overflowVincent Rouvreau
Warn about overflow/nan in knn
2021-11-02Merge pull request #490 from Hind-M/generate_points_torus_pythonVincent Rouvreau
First version of points generation on torus
2021-11-02Apply MG's suggestionVincent Rouvreau
2021-11-02Precise the torus is flatVincent Rouvreau
Co-authored-by: Marc Glisse <marc.glisse@inria.fr>
2021-11-02Merge pull request #522 from Hind-M/persistent_cohomologyVincent Rouvreau
Avoid confusion between dim and field of coeffs in persistent cohomology
2021-11-02Merge master and fix conflictsVincent Rouvreau
2021-10-27Add test to check outputs of the two torus implementationsHind-M
2021-10-27Replace itertools in grid torus generation function with something faster in ↵Hind-M
most general use cases
2021-10-26Add comments and some minor changes following code reviewHind-M
2021-10-25Merge branch 'knn_dtm_overflow' of https://github.com/Hind-M/gudhi-devel ↵Hind-M
into knn_dtm_overflow
2021-10-25Revert "Add warnings in dtm.py for DistanceToMeasure and DTMDensity"Hind-M
This reverts commit f461f050ee8bad509814b4851ab7ae8f43502962.
2021-10-25Revert "Add torch dependency for some python tests"Hind-M
This reverts commit 44659b4d5c2df18745e36280317ecbc9c6a5b411.
2021-10-21Factorize cpp and python torus tests implementationsHind-M
2021-10-08Merge branch 'master' into knn_dtm_overflowHind-M
2021-10-08Add torch dependency for some python testsHind-M
2021-10-08Add warnings in dtm.py for DistanceToMeasure and DTMDensityHind-M
Add DTMDensity warning test
2021-10-07Move warnings import to the beginning of knn.py fileHind-M
Use isfinite instead of isinf and isnan Use catch_warnings context manager instead of "always" with simplefilter
2021-09-22Rename function of torus cpp version and import it with sphere in pointsHind-M
Change documentation accordingly
2021-09-22Replace the doc sphere image plotted with trisurf with another using ↵Hind-M
scattered points
2021-09-13make_filtration_non_decreasing no more called in alpha complex dD exact ↵VincentRouvreau
version and exact and safe 3d versions
2021-09-08Set the warning filter to "always"Hind-M
Add test for dtm overflow warning
2021-09-07Merge pull request #527 from VincentRouvreau/fix_documentation_broken_linksVincent Rouvreau
Fix broken links. Add a tool to generate cpp example page
2021-08-31Fix broken links. Add a tool to generate cpp example pageROUVREAU Vincent
2021-08-30Fix dtm and knn failing testsHind-M
2021-08-27Fix issue #314Hind-M
Add overflow and nan warnings in knn when using torch and hnswlib
2021-08-26Fix #416ROUVREAU Vincent
2021-08-26Pybind11 is mandatory for python module (as explained in the doc and as it ↵ROUVREAU Vincent
is imported by setup.py)
2021-08-26Deploy pyproject.tomlROUVREAU Vincent
2021-08-26Add all build dependencies (to be buildable in a virtual env - even if cmake ↵ROUVREAU Vincent
already detects it)
2021-08-26remove install_requires as pep 518 recommandsROUVREAU Vincent
2021-08-25Remove irrelevant 'rips' word from persistent cohomology unit testsHind-M
2021-08-19Compress the different unit tests into two main categories: prime and non-primeHind-M
2021-08-16Fix issue #515 :Hind-M
Avoid confusion between dimension and field of coefficients in persistent_cohomology_unit_test.cpp and persistent_cohomology_unit_test_multi_field.cpp
2021-08-12Merge pull request #506 from VincentRouvreau/test_another_sphinx_themesVincent Rouvreau
Test another sphinx themes
2021-08-12Merge pull request #518 from VincentRouvreau/mailing_lists_migrationVincent Rouvreau
mailing lists migration and rephrase contributions in installation guides
2021-08-12Merge pull request #514 from GUDHI/mglisse-patch-2Vincent Rouvreau
Avoid v[0] for persistence of empty complex
2021-08-12Merge pull request #509 from Hind-M/homology_coeff_fieldVincent Rouvreau
Fix issue #502: check homology_coeff_field primality before computing persistence
2021-08-11Add test for sphere and torusHind-M
Fix numerical approximations inconsistencies with dim fraction exponent when generating points as grid on torus Add notes in doc regarding the torus versions use cases
2021-08-05mailing lists migration and rephrase contributions in installation guidesROUVREAU Vincent
2021-07-27Remove unnecessary checks for primalityHind-M
Document homology_coeff_field values in cubical
2021-07-24Avoid v[0] for persistence of empty complexMarc Glisse
It was reported by some debug mode while I was working on something else
2021-07-23Remove bad attribute maybe_unusedMarc Glisse
`CGAL_UNUSED` or `[[maybe_unused]]` is useful if we name the argument but don't use it. If we don't name it, the attribute is wrong as it would apply to the type and not the variable.
2021-07-12Limit homology_coeff_field value to max allowedHind-M
Add test with first prime outside the allowed range
2021-07-01Move primality test to Field_Zp::initHind-M
Throw exception when not prime Add tests
2021-06-29Fix issue #502: check homology_coeff_field primality before computing ↵Hind-M
persistence
2021-06-25Fix #486ROUVREAU Vincent
2021-06-25update headers, conf.py for the new theme and bottleneck image to be smallerROUVREAU Vincent
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