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2022-05-18Documentation: Doxygen warningsalbert-github
When running doxygen on the sources we get (a.o.) the following warnings: ``` .../gudhi-devel/src/Contraction/include/gudhi/Edge_contraction.h:214: warning: unbalanced grouping commands .../gudhi-devel/src/common/doc/examples.h:3: warning: the name 'Examples' supplied as the argument in the \file statement is not an input file error: bib file .../gudhi-devel/biblio/how_to_cite_gudhi.bib not found! .../gudhi-devel/src/common/doc/installation.h:271: warning: included file biblio/how_to_cite_gudhi.bib is not found. Check your EXAMPLE_PATH ``` This is corrected in the different files and in the settings in src/Doxyfile.in Also there are a number of settings that are obsolete like: ``` warning: Tag 'LATEX_SOURCE_CODE' at line 1835 of file '.../gudhi-devel/build_windows_fork/Doxyfile' has become obsolete. ``` This is corrected in the src/Doxyfile.in file
2022-05-17Missed reference found by VincentMarc Glisse
2022-05-17Merge remote-tracking branch 'origin/master' into collapse-pr2Marc Glisse
2022-05-16code review: use isinstance(x, T) instead of issubclass(type(x),T)Vincent Rouvreau
2022-05-16code review: limit test was not respecting the one described in the ↵Vincent Rouvreau
documentation
2022-05-10Fix limit tests for plot (and warning in test)Vincent Rouvreau
2022-05-09Merge pull request #504 from ↵Vincent Rouvreau
VincentRouvreau/persistence_graphical_tools_improvements Persistence graphical tools improvements
2022-04-29plot_persistence_diagram and plot_persistence_barcode improvementsVincent Rouvreau
2022-04-21Make Windows compilation fails on error (#598)Vincent Rouvreau
Use '-DEIGEN_DEFAULT_DENSE_INDEX_TYPE=int' as a workaround
2022-04-11Merge pull request #596 from ↵Vincent Rouvreau
VincentRouvreau/float_relative_precision_alpha_python Float relative precision alpha python
2022-04-06code review: Rewrite warnings in case of import errorsVincent Rouvreau
2022-04-06Merge remote-tracking branch 'upstream/master' into ↵Vincent Rouvreau
persistence_graphical_tools_improvements
2022-04-05nogil for float_relative_precision methodsVincent Rouvreau
2022-03-31code review: no need to nogil for cheap functions. Repeat ↵Vincent Rouvreau
get_float_relative_precision is only for safe mode
2022-03-31Test the featureVincent Rouvreau
2022-03-30Reintroduce parallel_sortMarc Glisse
2022-03-30get/set float_relative_precision and its documentationVincent Rouvreau
2022-03-30Remove this useless lineVincent Rouvreau
2022-03-29Tweak loop to avoid uninitialized variableMarc Glisse
2022-03-29long linesMarc Glisse
2022-03-28doc review: add a warning about phantom simplices for blocker_funcVincent Rouvreau
2022-03-28doc review: remove segfault note as it is no more the caseVincent Rouvreau
2022-03-24rename neighbors2Marc Glisse
2022-03-24Remove unnecessary clear()Marc Glisse
2022-03-24Clean up includesMarc Glisse
2022-03-24Rewrite python docMarc Glisse
2022-03-24Update the main page of the docMarc Glisse
2022-03-22Update doc and biblioMarc Glisse
2022-03-21Add some c++ tests and use unitary_tests_utils. Fix python testVincent Rouvreau
2022-03-21code review: assign_children(new_sib) was happening too lateVincent Rouvreau
2022-03-08Merge master and resolve commitsVincent Rouvreau
2022-03-07tangential - include simplex tree when usedVincent Rouvreau
2022-03-02Purge GUDHI_USE_EIGEN3Marc Glisse
2022-03-01Merge pull request #582 from VincentRouvreau/stree_copy_pythonVincent Rouvreau
Add SimplexTree copy method and its test
2022-02-28code review: copy simplex tree c++ pointer in a factorized nogil functionVincent Rouvreau
2022-02-28doc review: reformulate the copy notesVincent Rouvreau
2022-02-28code review: use 'isinstance' instead of 'type'Vincent Rouvreau
2022-02-22Remove mention of eigenMarc Glisse
2022-02-18Remove gcc attributeMarc Glisse
2022-02-18edge collapse doesn't use eigen anymoreMarc Glisse
2022-02-18Less arbitrary testMarc Glisse
2022-02-18No if constexpr yetMarc Glisse
2022-02-18Document the right functionMarc Glisse
2022-02-18doc detailsMarc Glisse
2022-02-18Remove dead code.Marc Glisse
2022-02-18Remove NO_REMOVE_NGBMarc Glisse
2022-02-18Remove the old forward version of edge collapseMarc Glisse
2022-02-18Skip the intermediate event / timeline representation, it doesn't seem ↵Marc Glisse
useful anymore
2022-02-18Replace the map of events with a vectorMarc Glisse
approximate version is probably broken for now
2022-02-18commentMarc Glisse