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AgeCommit message (Collapse)Author
2021-08-05mailing lists migration and rephrase contributions in installation guidesROUVREAU Vincent
2021-07-23Remove bad attribute maybe_unusedMarc Glisse
`CGAL_UNUSED` or `[[maybe_unused]]` is useful if we name the argument but don't use it. If we don't name it, the attribute is wrong as it would apply to the type and not the variable.
2021-05-28Merge pull request #481 from Hind-M/generate_points_sphere_pythonVincent Rouvreau
Add random points generator on sphere in python, with an example
2021-05-28Merge pull request #365 from tlacombe/essential_part_in_wassersteinVincent Rouvreau
Essential part in wasserstein
2021-05-26Change some output messages and documentation to me more explicitHind-M
2021-05-25Add a separator argument that goes with the ↵Hind-M
rips_complex_diagram_persistence_from_distance_matrix_file_example input file Specify explicitly the separator when using a specific input file
2021-05-21Fix issue #489 RipsComplex out of bounds accessHind-M
2021-05-10Rename dim to ambient_dim for sphere (to be consistent with dim in torus)Hind Montassif
2021-05-05Add __init__ files at every level in modulesHind Montassif
Remove last modules level and add sample type argument Rename num_points to n_samples
2021-05-05Merge pull request #488 from VincentRouvreau/numpy_minimal_versionVincent Rouvreau
numpy.take_along_axis used in knn requires numpy>=1.15.0
2021-05-04Set Simplex_tree_interface_full_featured constructor name (Simplex_tree) to ↵Hind Montassif
the class name
2021-05-03Merge pull request #484 from VincentRouvreau/doxygen_improvementVincent Rouvreau
Doxygen documentation improvement
2021-04-29numpy.take_along_axis used in knn requires numpy>=1.15.0ROUVREAU Vincent
2021-04-28Add points (dataset type) before the underlying model (sphere) as a moduleHind
2021-04-28enhancing the doc2tlacombe
2021-04-28enhancing the doctlacombe
2021-04-28update DoxyfileROUVREAU Vincent
2021-04-27Rename and reorganize point generators moduleHind
2021-04-27Doxygen documentation improvementROUVREAU Vincent
2021-04-27Remove the commented graphic part from the example (to be added to tutorial ↵Hind
notebooks)
2021-04-27changed infty to inf in doctlacombe
2021-04-27now consider (inf,inf) as belonging to the diagonal ; more teststlacombe
2021-04-27Merge branch 'essential_part_in_wasserstein' of ↵tlacombe
https://github.com/tlacombe/gudhi-devel into essential_part_in_wasserstein merging typo correction
2021-04-27Typo - Update src/python/gudhi/wasserstein/wasserstein.pyThéo Lacombe
Co-authored-by: Vincent Rouvreau <10407034+VincentRouvreau@users.noreply.github.com>
2021-04-27Typo correction - Update src/python/gudhi/wasserstein/wasserstein.pyThéo Lacombe
Co-authored-by: Vincent Rouvreau <10407034+VincentRouvreau@users.noreply.github.com>
2021-04-27Remove make install target from python and rewrite documentation accordinglyROUVREAU Vincent
2021-04-26Replace assert with GUDHI_CHECKHind
Make the function non-template Change typing and casting
2021-04-26Merge pull request #480 from Hind-M/replace_hardcoded_piVincent Rouvreau
Replace hardcoded PI with M_PI from cmath
2021-04-24Merge pull request #476 from mglisse/farMarc Glisse
Sparse Rips and choose_n_farthest_points, fix #456
2021-04-23Use double_constants instead of templated constantsHind
Use the boost double_constants namespace in each function that needs two_pi
2021-04-23Make adjustments according to the received reviewsHind
2021-04-23Get pi constant from boost instead of cmath (to be replaced with the C++20 ↵Hind
standard one eventually)
2021-04-22Fix return type of source/targetMarc Glisse
2021-04-22Add random points generator on sphere in python, with an exampleHind
2021-04-22Replace hardcoded PI with M_PI from cmathHind
2021-04-21typo correctedtlacombe
2021-04-20Vertex_handle -> size_tMarc Glisse
2021-04-20Targeted include, more constMarc Glisse
2021-04-20update doc and teststlacombe
2021-04-19Merge pull request #472 from mglisse/colorVincent Rouvreau
Fix contradictory color
2021-04-17Safely drop some vertices in sparse RipsMarc Glisse
2021-04-17Introduce a custom graph typeMarc Glisse
2021-04-17Don't qualify calls for the graph conceptMarc Glisse
2021-04-17Sparse Rips: disable `mini`, optimize a bit redundant pointsMarc Glisse
2021-04-17Rewrite choose_n_farthest_pointsMarc Glisse
Introduce an indirection to help with points with multiplicity. Limit the use of magic values like 0 and infinity.
2021-04-16Merge pull request #471 from Hind-M/cython_set_language_levelVincent Rouvreau
Set Cython language level in setup.py to remove warning, and fix python3 implicit relative imports disability
2021-04-15Merge pull request #474 from mglisse/cmplistMarc Glisse
Compare lists with ==
2021-04-15Name the argument n_neighbors of NearestNeighborsMarc Glisse
It seems that it has had the same name for a while, so this shouldn't break anything. sklearn/utils/validation.py:70: FutureWarning: Pass n_neighbors=3 as keyword args. From version 1.0 (renaming of 0.25) passing these as positional arguments will result in an error
2021-04-15Compare lists with ==Marc Glisse
numpy/core/_asarray.py:102: VisibleDeprecationWarning: Creating an ndarray from ragged nested sequences (which is a list-or-tuple of lists-or-tuples-or ndarrays with different lengths or shapes) is deprecated. If you meant to do this, you must specify 'dtype=object' when creating the ndarray.
2021-04-15Fix contradictory colorMarc Glisse
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