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2022-08-09Use CGAL::CGAL_BOOST_PENDING_RELAXED_HEAP to have the exact same result - ↵Vincent Rouvreau
needs to invetigate to understand why
2022-08-09Use boolean for pq_handle data type and specific update use for CGAL>=5.5Vincent Rouvreau
2022-08-09Merge pull request #584 from Soriano-Trigueros/masterVincent Rouvreau
A bug in the Entropy function has been solved
2022-08-05Test the numpy versionwreise
2022-08-05Merge remote-tracking branch 'upstream/master' into cech_exactHind-M
2022-08-05code review: transform rtype was not correctVincent Rouvreau
2022-08-05code review: no need of default value for homology_dimensionsVincent Rouvreau
2022-08-05Merge remote-tracking branch 'upstream/master' into cech_check_filtHind-M
2022-08-05Ensure valid filtration before setting it in cechHind-M
2022-08-05Merge master and fix conflictsVincent Rouvreau
2022-08-05Merge pull request #650 from Hind-M/cech_optiVincent Rouvreau
[Cech] Assign to sh same key as face
2022-08-05Merge pull request #660 from Hind-M/keops_dtm_warningsVincent Rouvreau
Enable keops dtm warnings
2022-08-04Use exact option when computing edges filtrations as well in cechHind-M
2022-08-03Remove useless exact option when getting filtration from faceHind-M
2022-08-02Get filtration from face regardless of key valueHind-M
2022-08-02Pull out the for loop in testHind-M
2022-08-02Get filtration from face when it's the same as simplexHind-M
2022-07-28Modify doc in simplex_tree in order to match codeHind-M
2022-07-27Enable keops dtm warningsHind-M
2022-07-06Move clog of radius after its assignmentHind-M
2022-07-06Switch lines to use intermediate variableHind-M
2022-07-06Use reference to sph for a better readabilityHind-M
2022-07-05Merge remote-tracking branch 'upstream/master' into cech_optiHind-M
2022-07-05No need for a sph copy anymoreHind-M
2022-07-04Merge pull request #657 from albert-github/feature/bug_docu_build_dirVincent Rouvreau
Ignore complete current build directory when building documentation
2022-07-04[skip ci] Merge pull request #653 from albert-github/feature/bug_strip_pathVincent Rouvreau
Don't reveal full path in the documentation but just the relative path
2022-07-04Merge pull request #652 from Hind-M/cech_opti_vectorVincent Rouvreau
[Cech] Reuse vector of points and reserve to avoid reallocations
2022-07-01Use dimension to get range size to reserve vector in cechHind-M
2022-07-01Ignore complete current build directory when building documentationalbert-github
Found the file ``` build/CMakeFiles/ShowIncludes/foo.h ``` during the build of the documentation. The build directory should be excluded.
2022-07-01Don't reveal full path in the documentation but just the relative pathalbert-github
In e,g, https://gudhi.inria.fr/doc/latest/struct_coefficient_field.html (in general in `../struct_coefficient_field.html`) we see lines like: ``` #include </home/gailuron/workspace/gudhi/gudhi-devel/build/gudhi.3.5.0/concept/Persistent_cohomology/CoefficientField.h> ``` and ``` The documentation for this struct was generated from the following file: /home/gailuron/workspace/gudhi/gudhi-devel/build/gudhi.3.5.0/concept/Persistent_cohomology/CoefficientField.h ``` instead of the relative names: ``` #include <src/Persistent_cohomology/concept/CoefficientField.h> ``` and ``` The documentation for this struct was generated from the following file: src/Persistent_cohomology/concept/CoefficientField.h ``` (the links are pointing to the correct places in all cases.) This is corrected by stripping the path.
2022-06-30Merge pull request #641 from VincentRouvreau/doxygen_onlyVincent Rouvreau
Doxygen only
2022-06-30Reuse vector of points and reserve to avoid reallocationsHind-M
2022-06-30code review: rename option WITH_GUDHI_THIRD_PARTYVincent Rouvreau
2022-06-30Assign to sh same key as face in cechHind-M
2022-06-29Merge pull request #642 from Hind-M/cech_extra_pointVincent Rouvreau
[Cech] Get extra point using boundary_opposite_vertex_simplex_range
2022-06-29third parties are not required when WITH_GUDHI_CPP_DOCUMENTATION_ONLY, but ↵Vincent Rouvreau
hera submodule is mandatory. Moved in a new cmake module
2022-06-29Merge pull request #637 from albert-github/feature/issue_613Vincent Rouvreau
issue #613 [cpp documentation] Footer needs to be generated with a more recent version of doxygen
2022-06-28doc review: missing parenthesisVincent Rouvreau
Co-authored-by: Marc Glisse <marc.glisse@inria.fr>
2022-06-27doc review: Full path for representations gudhi module for sphinx to find ↵Vincent Rouvreau
the modules
2022-06-24changed dimensions into homology_dimensionsMathieuCarriere
2022-06-24Merge branch 'master' of https://github.com/GUDHI/gudhi-devel into diffMathieuCarriere
2022-06-24Merge remote-tracking branch 'upstream/master' into cech_extra_pointHind-M
2022-06-24Merge pull request #519 from Hind-M/cech_optimizationVincent Rouvreau
Cech optimization
2022-06-24Use CGAL::NT_converter instead of CGAL::to_double in Sphere_circumradiusHind-M
2022-06-21-Add/modify some commentsHind-M
-Some other minor changes -Change license to LGPL
2022-06-20code review: rename homology_dimensions argument. Use and document numpy ↵Vincent Rouvreau
reshape instead of cubical dimension argument
2022-06-20Merge branch 'master' of https://github.com/GUDHI/gudhi-devel into diffMathieuCarriere
2022-06-20Merge pull request #643 from VincentRouvreau/alpha_extra_pointVincent Rouvreau
[Alpha] Get extra point using boundary_opposite_vertex_simplex_range
2022-06-17doc review: tuple instead of pair - index is 'm' and not 'n'Vincent Rouvreau
2022-06-17Merge branch 'master' of https://github.com/GUDHI/gudhi-devel into diffMathieuCarriere
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