From 599d68cd916f533bdb66dd9e684dd5703233b6bb Mon Sep 17 00:00:00 2001 From: Gard Spreemann Date: Wed, 25 Sep 2019 14:29:41 +0200 Subject: Delete all files in order to incorporate upstream's move to git. --- example/Rips_complex/CMakeLists.txt | 71 ------------------- ...e_one_skeleton_rips_from_correlation_matrix.cpp | 81 ---------------------- ...mple_one_skeleton_rips_from_distance_matrix.cpp | 58 ---------------- .../example_one_skeleton_rips_from_points.cpp | 52 -------------- ..._rips_complex_from_csv_distance_matrix_file.cpp | 72 ------------------- .../example_rips_complex_from_off_file.cpp | 71 ------------------- example/Rips_complex/example_sparse_rips.cpp | 30 -------- .../Rips_complex/full_skeleton_rips_for_doc.txt | 26 ------- example/Rips_complex/one_skeleton_rips_for_doc.txt | 20 ------ ...eleton_rips_from_correlation_matrix_for_doc.txt | 17 ----- 10 files changed, 498 deletions(-) delete mode 100644 example/Rips_complex/CMakeLists.txt delete mode 100644 example/Rips_complex/example_one_skeleton_rips_from_correlation_matrix.cpp delete mode 100644 example/Rips_complex/example_one_skeleton_rips_from_distance_matrix.cpp delete mode 100644 example/Rips_complex/example_one_skeleton_rips_from_points.cpp delete mode 100644 example/Rips_complex/example_rips_complex_from_csv_distance_matrix_file.cpp delete mode 100644 example/Rips_complex/example_rips_complex_from_off_file.cpp delete mode 100644 example/Rips_complex/example_sparse_rips.cpp delete mode 100644 example/Rips_complex/full_skeleton_rips_for_doc.txt delete mode 100644 example/Rips_complex/one_skeleton_rips_for_doc.txt delete mode 100644 example/Rips_complex/one_skeleton_rips_from_correlation_matrix_for_doc.txt (limited to 'example/Rips_complex') diff --git a/example/Rips_complex/CMakeLists.txt b/example/Rips_complex/CMakeLists.txt deleted file mode 100644 index e7772bdb..00000000 --- a/example/Rips_complex/CMakeLists.txt +++ /dev/null @@ -1,71 +0,0 @@ -project(Rips_complex_examples) - -# Point cloud -add_executable ( Rips_complex_example_from_off example_rips_complex_from_off_file.cpp ) - -add_executable ( Rips_complex_example_one_skeleton_from_points example_one_skeleton_rips_from_points.cpp ) - -# Distance matrix -add_executable ( Rips_complex_example_one_skeleton_from_distance_matrix example_one_skeleton_rips_from_distance_matrix.cpp ) - -add_executable ( Rips_complex_example_from_csv_distance_matrix example_rips_complex_from_csv_distance_matrix_file.cpp ) - -# Sparse rips from points -add_executable ( Rips_complex_example_sparse example_sparse_rips.cpp ) - -# Correlation matrix -add_executable ( Rips_complex_example_one_skeleton_rips_from_correlation_matrix example_one_skeleton_rips_from_correlation_matrix.cpp ) - -if (TBB_FOUND) - target_link_libraries(Rips_complex_example_from_off ${TBB_LIBRARIES}) - target_link_libraries(Rips_complex_example_one_skeleton_from_points ${TBB_LIBRARIES}) - target_link_libraries(Rips_complex_example_one_skeleton_from_distance_matrix ${TBB_LIBRARIES}) - target_link_libraries(Rips_complex_example_from_csv_distance_matrix ${TBB_LIBRARIES}) - target_link_libraries(Rips_complex_example_sparse ${TBB_LIBRARIES}) - target_link_libraries(Rips_complex_example_one_skeleton_rips_from_correlation_matrix ${TBB_LIBRARIES}) -endif() - -add_test(NAME Rips_complex_example_one_skeleton_from_points - COMMAND $) -add_test(NAME Rips_complex_example_one_skeleton_from_distance_matrix - COMMAND $) -add_test(NAME Rips_complex_example_sparse - COMMAND $) -add_test(NAME Rips_complex_example_one_skeleton_rips_from_correlation_matrix - COMMAND $) - -add_test(NAME Rips_complex_example_from_off_doc_12_1 COMMAND $ - "${CMAKE_SOURCE_DIR}/data/points/alphacomplexdoc.off" "12.0" "1" "${CMAKE_CURRENT_BINARY_DIR}/ripsoffreader_result_12_1.txt") -add_test(NAME Rips_complex_example_from_off_doc_12_3 COMMAND $ - "${CMAKE_SOURCE_DIR}/data/points/alphacomplexdoc.off" "12.0" "3" "${CMAKE_CURRENT_BINARY_DIR}/ripsoffreader_result_12_3.txt") - -add_test(NAME Rips_complex_example_from_csv_distance_matrix_doc_12_1 COMMAND $ - "${CMAKE_SOURCE_DIR}/data/distance_matrix/full_square_distance_matrix.csv" "12.0" "1" "${CMAKE_CURRENT_BINARY_DIR}/ripscsvreader_result_12_1.txt") -add_test(NAME Rips_complex_example_from_csv_distance_matrix_doc_12_3 COMMAND $ - "${CMAKE_SOURCE_DIR}/data/distance_matrix/full_square_distance_matrix.csv" "12.0" "3" "${CMAKE_CURRENT_BINARY_DIR}/ripscsvreader_result_12_3.txt") - - -if (DIFF_PATH) - # Do not forget to copy test results files in current binary dir - file(COPY "one_skeleton_rips_for_doc.txt" DESTINATION ${CMAKE_CURRENT_BINARY_DIR}/) - file(COPY "full_skeleton_rips_for_doc.txt" DESTINATION ${CMAKE_CURRENT_BINARY_DIR}/) - - add_test(Rips_complex_example_from_off_doc_12_1_diff_files ${DIFF_PATH} - ${CMAKE_CURRENT_BINARY_DIR}/ripsoffreader_result_12_1.txt - ${CMAKE_CURRENT_BINARY_DIR}/one_skeleton_rips_for_doc.txt) - add_test(Rips_complex_example_from_off_doc_12_3_diff_files ${DIFF_PATH} - ${CMAKE_CURRENT_BINARY_DIR}/ripsoffreader_result_12_3.txt - ${CMAKE_CURRENT_BINARY_DIR}/full_skeleton_rips_for_doc.txt) - add_test(Rips_complex_example_from_csv_distance_matrix_doc_12_1_diff_files ${DIFF_PATH} - ${CMAKE_CURRENT_BINARY_DIR}/ripscsvreader_result_12_1.txt - ${CMAKE_CURRENT_BINARY_DIR}/one_skeleton_rips_for_doc.txt) - add_test(Rips_complex_example_from_csv_distance_matrix_doc_12_3_diff_files ${DIFF_PATH} - ${CMAKE_CURRENT_BINARY_DIR}/ripscsvreader_result_12_3.txt - ${CMAKE_CURRENT_BINARY_DIR}/full_skeleton_rips_for_doc.txt) -endif() - -install(TARGETS Rips_complex_example_from_off DESTINATION bin) -install(TARGETS Rips_complex_example_one_skeleton_from_points DESTINATION bin) -install(TARGETS Rips_complex_example_one_skeleton_from_distance_matrix DESTINATION bin) -install(TARGETS Rips_complex_example_from_csv_distance_matrix DESTINATION bin) -install(TARGETS Rips_complex_example_one_skeleton_rips_from_correlation_matrix DESTINATION bin) diff --git a/example/Rips_complex/example_one_skeleton_rips_from_correlation_matrix.cpp b/example/Rips_complex/example_one_skeleton_rips_from_correlation_matrix.cpp deleted file mode 100644 index 05bacb9f..00000000 --- a/example/Rips_complex/example_one_skeleton_rips_from_correlation_matrix.cpp +++ /dev/null @@ -1,81 +0,0 @@ -#include -#include -#include - -#include -#include -#include -#include // for std::numeric_limits - -int main() { - // Type definitions - using Simplex_tree = Gudhi::Simplex_tree<>; - using Filtration_value = Simplex_tree::Filtration_value; - using Rips_complex = Gudhi::rips_complex::Rips_complex; - using Distance_matrix = std::vector>; - - // User defined correlation matrix is: - // |1 0.06 0.23 0.01 0.89| - // |0.06 1 0.74 0.01 0.61| - // |0.23 0.74 1 0.72 0.03| - // |0.01 0.01 0.72 1 0.7 | - // |0.89 0.61 0.03 0.7 1 | - - Distance_matrix correlations; - correlations.push_back({}); - correlations.push_back({0.06}); - correlations.push_back({0.23, 0.74}); - correlations.push_back({0.01, 0.01, 0.72}); - correlations.push_back({0.89, 0.61, 0.03, 0.7}); - - // ---------------------------------------------------------------------------- - // Convert correlation matrix to a distance matrix: - // ---------------------------------------------------------------------------- - double threshold = 0; - for (size_t i = 0; i != correlations.size(); ++i) { - for (size_t j = 0; j != correlations[i].size(); ++j) { - // Here we check if our data comes from corelation matrix. - if ((correlations[i][j] < -1) || (correlations[i][j] > 1)) { - std::cerr << "The input matrix is not a correlation matrix. The program will now terminate.\n"; - throw "The input matrix is not a correlation matrix. The program will now terminate.\n"; - } - correlations[i][j] = 1 - correlations[i][j]; - // Here we make sure that we will get the treshold value equal to maximal - // distance in the matrix. - if (correlations[i][j] > threshold) threshold = correlations[i][j]; - } - } - - //----------------------------------------------------------------------------- - // Now the correlation matrix is a distance matrix and can be processed further. - //----------------------------------------------------------------------------- - Distance_matrix distances = correlations; - - Rips_complex rips_complex_from_points(distances, threshold); - - Simplex_tree stree; - rips_complex_from_points.create_complex(stree, 1); - // ---------------------------------------------------------------------------- - // Display information about the one skeleton Rips complex. Note that - // the filtration displayed here comes from the distance matrix computed - // above, which is 1 - initial correlation matrix. Only this way, we obtain - // a complex with filtration. If a correlation matrix is used instead, we would - // have a reverse filtration (i.e. filtration of boundary of each simplex S - // is greater or equal to the filtration of S). - // ---------------------------------------------------------------------------- - std::cout << "Rips complex is of dimension " << stree.dimension() << " - " << stree.num_simplices() << " simplices - " - << stree.num_vertices() << " vertices." << std::endl; - - std::cout << "Iterator on Rips complex simplices in the filtration order, with [filtration value]:" << std::endl; - for (auto f_simplex : stree.filtration_simplex_range()) { - std::cout << " ( "; - for (auto vertex : stree.simplex_vertex_range(f_simplex)) { - std::cout << vertex << " "; - } - std::cout << ") -> " - << "[" << stree.filtration(f_simplex) << "] "; - std::cout << std::endl; - } - - return 0; -} diff --git a/example/Rips_complex/example_one_skeleton_rips_from_distance_matrix.cpp b/example/Rips_complex/example_one_skeleton_rips_from_distance_matrix.cpp deleted file mode 100644 index bbc3c755..00000000 --- a/example/Rips_complex/example_one_skeleton_rips_from_distance_matrix.cpp +++ /dev/null @@ -1,58 +0,0 @@ -#include -#include -#include - -#include -#include -#include -#include // for std::numeric_limits - -int main() { - // Type definitions - using Simplex_tree = Gudhi::Simplex_tree<>; - using Filtration_value = Simplex_tree::Filtration_value; - using Rips_complex = Gudhi::rips_complex::Rips_complex; - using Distance_matrix = std::vector>; - - // User defined distance matrix is: - // | 0 0.94 0.77 0.99 0.11 | - // | 0.94 0 0.26 0.99 0.39 | - // | 0.77 0.26 0 0.28 0.97 | - // | 0.99 0.99 0.28 0 0.30 | - // | 0.11 0.39 0.97 0.30 0 | - - Distance_matrix distances; - distances.push_back({}); - distances.push_back({0.94}); - distances.push_back({0.77, 0.26}); - distances.push_back({0.99, 0.99, 0.28}); - distances.push_back({0.11, 0.39, 0.97, 0.30}); - - // ---------------------------------------------------------------------------- - // Init of a Rips complex from points - // ---------------------------------------------------------------------------- - double threshold = 1.0; - Rips_complex rips_complex_from_points(distances, threshold); - - Simplex_tree stree; - rips_complex_from_points.create_complex(stree, 1); - // ---------------------------------------------------------------------------- - // Display information about the one skeleton Rips complex - // ---------------------------------------------------------------------------- - std::cout << "Rips complex is of dimension " << stree.dimension() << - " - " << stree.num_simplices() << " simplices - " << - stree.num_vertices() << " vertices." << std::endl; - - std::cout << "Iterator on Rips complex simplices in the filtration order, with [filtration value]:" << - std::endl; - for (auto f_simplex : stree.filtration_simplex_range()) { - std::cout << " ( "; - for (auto vertex : stree.simplex_vertex_range(f_simplex)) { - std::cout << vertex << " "; - } - std::cout << ") -> " << "[" << stree.filtration(f_simplex) << "] "; - std::cout << std::endl; - } - - return 0; -} diff --git a/example/Rips_complex/example_one_skeleton_rips_from_points.cpp b/example/Rips_complex/example_one_skeleton_rips_from_points.cpp deleted file mode 100644 index a1db8910..00000000 --- a/example/Rips_complex/example_one_skeleton_rips_from_points.cpp +++ /dev/null @@ -1,52 +0,0 @@ -#include -#include -#include - -#include -#include -#include -#include // for std::numeric_limits - -int main() { - // Type definitions - using Point = std::vector; - using Simplex_tree = Gudhi::Simplex_tree; - using Filtration_value = Simplex_tree::Filtration_value; - using Rips_complex = Gudhi::rips_complex::Rips_complex; - - std::vector points; - points.push_back({1.0, 1.0}); - points.push_back({7.0, 0.0}); - points.push_back({4.0, 6.0}); - points.push_back({9.0, 6.0}); - points.push_back({0.0, 14.0}); - points.push_back({2.0, 19.0}); - points.push_back({9.0, 17.0}); - - // ---------------------------------------------------------------------------- - // Init of a Rips complex from points - // ---------------------------------------------------------------------------- - double threshold = 12.0; - Rips_complex rips_complex_from_points(points, threshold, Gudhi::Euclidean_distance()); - - Simplex_tree stree; - rips_complex_from_points.create_complex(stree, 1); - // ---------------------------------------------------------------------------- - // Display information about the one skeleton Rips complex - // ---------------------------------------------------------------------------- - std::cout << "Rips complex is of dimension " << stree.dimension() << - " - " << stree.num_simplices() << " simplices - " << - stree.num_vertices() << " vertices." << std::endl; - - std::cout << "Iterator on Rips complex simplices in the filtration order, with [filtration value]:" << - std::endl; - for (auto f_simplex : stree.filtration_simplex_range()) { - std::cout << " ( "; - for (auto vertex : stree.simplex_vertex_range(f_simplex)) { - std::cout << vertex << " "; - } - std::cout << ") -> " << "[" << stree.filtration(f_simplex) << "] "; - std::cout << std::endl; - } - return 0; -} diff --git a/example/Rips_complex/example_rips_complex_from_csv_distance_matrix_file.cpp b/example/Rips_complex/example_rips_complex_from_csv_distance_matrix_file.cpp deleted file mode 100644 index 9e182f1e..00000000 --- a/example/Rips_complex/example_rips_complex_from_csv_distance_matrix_file.cpp +++ /dev/null @@ -1,72 +0,0 @@ -#include -// to construct Rips_complex from a csv file representing a distance matrix -#include -#include -#include - -#include -#include -#include - -void usage(int nbArgs, char * const progName) { - std::cerr << "Error: Number of arguments (" << nbArgs << ") is not correct\n"; - std::cerr << "Usage: " << progName << " filename.csv threshold dim_max [ouput_file.txt]\n"; - std::cerr << " i.e.: " << progName << " ../../data/distance_matrix/full_square_distance_matrix.csv 1.0 3\n"; - exit(-1); // ----- >> -} - -int main(int argc, char **argv) { - if ((argc != 4) && (argc != 5)) usage(argc, (argv[0] - 1)); - - std::string csv_file_name(argv[1]); - double threshold = atof(argv[2]); - int dim_max = atoi(argv[3]); - - // Type definitions - using Simplex_tree = Gudhi::Simplex_tree<>; - using Filtration_value = Simplex_tree::Filtration_value; - using Rips_complex = Gudhi::rips_complex::Rips_complex; - using Distance_matrix = std::vector>; - - // ---------------------------------------------------------------------------- - // Init of a Rips complex from a distance matrix in a csv file - // Default separator is ';' - // ---------------------------------------------------------------------------- - Distance_matrix distances = Gudhi::read_lower_triangular_matrix_from_csv_file(csv_file_name); - Rips_complex rips_complex_from_file(distances, threshold); - - std::streambuf* streambufffer; - std::ofstream ouput_file_stream; - - if (argc == 5) { - ouput_file_stream.open(std::string(argv[4])); - streambufffer = ouput_file_stream.rdbuf(); - } else { - streambufffer = std::cout.rdbuf(); - } - - Simplex_tree stree; - rips_complex_from_file.create_complex(stree, dim_max); - std::ostream output_stream(streambufffer); - - // ---------------------------------------------------------------------------- - // Display information about the Rips complex - // ---------------------------------------------------------------------------- - output_stream << "Rips complex is of dimension " << stree.dimension() << - " - " << stree.num_simplices() << " simplices - " << - stree.num_vertices() << " vertices." << std::endl; - - output_stream << "Iterator on Rips complex simplices in the filtration order, with [filtration value]:" << - std::endl; - for (auto f_simplex : stree.filtration_simplex_range()) { - output_stream << " ( "; - for (auto vertex : stree.simplex_vertex_range(f_simplex)) { - output_stream << vertex << " "; - } - output_stream << ") -> " << "[" << stree.filtration(f_simplex) << "] "; - output_stream << std::endl; - } - - ouput_file_stream.close(); - return 0; -} diff --git a/example/Rips_complex/example_rips_complex_from_off_file.cpp b/example/Rips_complex/example_rips_complex_from_off_file.cpp deleted file mode 100644 index de2e4ea4..00000000 --- a/example/Rips_complex/example_rips_complex_from_off_file.cpp +++ /dev/null @@ -1,71 +0,0 @@ -#include -// to construct Rips_complex from a OFF file of points -#include -#include -#include - -#include -#include -#include - -void usage(int nbArgs, char * const progName) { - std::cerr << "Error: Number of arguments (" << nbArgs << ") is not correct\n"; - std::cerr << "Usage: " << progName << " filename.off threshold dim_max [ouput_file.txt]\n"; - std::cerr << " i.e.: " << progName << " ../../data/points/alphacomplexdoc.off 60.0\n"; - exit(-1); // ----- >> -} - -int main(int argc, char **argv) { - if ((argc != 4) && (argc != 5)) usage(argc, (argv[0] - 1)); - - std::string off_file_name(argv[1]); - double threshold = atof(argv[2]); - int dim_max = atoi(argv[3]); - - // Type definitions - using Point = std::vector; - using Simplex_tree = Gudhi::Simplex_tree<>; - using Filtration_value = Simplex_tree::Filtration_value; - using Rips_complex = Gudhi::rips_complex::Rips_complex; - - // ---------------------------------------------------------------------------- - // Init of a Rips complex from an OFF file - // ---------------------------------------------------------------------------- - Gudhi::Points_off_reader off_reader(off_file_name); - Rips_complex rips_complex_from_file(off_reader.get_point_cloud(), threshold, Gudhi::Euclidean_distance()); - - std::streambuf* streambufffer; - std::ofstream ouput_file_stream; - - if (argc == 5) { - ouput_file_stream.open(std::string(argv[4])); - streambufffer = ouput_file_stream.rdbuf(); - } else { - streambufffer = std::cout.rdbuf(); - } - - Simplex_tree stree; - rips_complex_from_file.create_complex(stree, dim_max); - std::ostream output_stream(streambufffer); - - // ---------------------------------------------------------------------------- - // Display information about the Rips complex - // ---------------------------------------------------------------------------- - output_stream << "Rips complex is of dimension " << stree.dimension() << - " - " << stree.num_simplices() << " simplices - " << - stree.num_vertices() << " vertices." << std::endl; - - output_stream << "Iterator on Rips complex simplices in the filtration order, with [filtration value]:" << - std::endl; - for (auto f_simplex : stree.filtration_simplex_range()) { - output_stream << " ( "; - for (auto vertex : stree.simplex_vertex_range(f_simplex)) { - output_stream << vertex << " "; - } - output_stream << ") -> " << "[" << stree.filtration(f_simplex) << "] "; - output_stream << std::endl; - } - - ouput_file_stream.close(); - return 0; -} diff --git a/example/Rips_complex/example_sparse_rips.cpp b/example/Rips_complex/example_sparse_rips.cpp deleted file mode 100644 index 1c95b48c..00000000 --- a/example/Rips_complex/example_sparse_rips.cpp +++ /dev/null @@ -1,30 +0,0 @@ -#include -#include -#include - -#include -#include - -int main() { - using Point = std::vector; - using Simplex_tree = Gudhi::Simplex_tree; - using Filtration_value = Simplex_tree::Filtration_value; - using Sparse_rips = Gudhi::rips_complex::Sparse_rips_complex; - - Point points[] = {{1.0, 1.0}, {7.0, 0.0}, {4.0, 6.0}, {9.0, 6.0}, {0.0, 14.0}, {2.0, 19.0}, {9.0, 17.0}}; - - // ---------------------------------------------------------------------------- - // Init from Euclidean points - // ---------------------------------------------------------------------------- - double epsilon = 2; // very rough, no guarantees - Sparse_rips sparse_rips(points, Gudhi::Euclidean_distance(), epsilon); - - Simplex_tree stree; - sparse_rips.create_complex(stree, 10); - - // ---------------------------------------------------------------------------- - // Display information about the complex - // ---------------------------------------------------------------------------- - std::cout << "Sparse Rips complex is of dimension " << stree.dimension() << " - " << stree.num_simplices() - << " simplices - " << stree.num_vertices() << " vertices." << std::endl; -} diff --git a/example/Rips_complex/full_skeleton_rips_for_doc.txt b/example/Rips_complex/full_skeleton_rips_for_doc.txt deleted file mode 100644 index 55de4ab8..00000000 --- a/example/Rips_complex/full_skeleton_rips_for_doc.txt +++ /dev/null @@ -1,26 +0,0 @@ -Rips complex is of dimension 3 - 24 simplices - 7 vertices. -Iterator on Rips complex simplices in the filtration order, with [filtration value]: - ( 0 ) -> [0] - ( 1 ) -> [0] - ( 2 ) -> [0] - ( 3 ) -> [0] - ( 4 ) -> [0] - ( 5 ) -> [0] - ( 6 ) -> [0] - ( 3 2 ) -> [5] - ( 5 4 ) -> [5.38516] - ( 2 0 ) -> [5.83095] - ( 1 0 ) -> [6.08276] - ( 3 1 ) -> [6.32456] - ( 2 1 ) -> [6.7082] - ( 2 1 0 ) -> [6.7082] - ( 3 2 1 ) -> [6.7082] - ( 6 5 ) -> [7.28011] - ( 4 2 ) -> [8.94427] - ( 3 0 ) -> [9.43398] - ( 3 1 0 ) -> [9.43398] - ( 3 2 0 ) -> [9.43398] - ( 3 2 1 0 ) -> [9.43398] - ( 6 4 ) -> [9.48683] - ( 6 5 4 ) -> [9.48683] - ( 6 3 ) -> [11] diff --git a/example/Rips_complex/one_skeleton_rips_for_doc.txt b/example/Rips_complex/one_skeleton_rips_for_doc.txt deleted file mode 100644 index 706512a5..00000000 --- a/example/Rips_complex/one_skeleton_rips_for_doc.txt +++ /dev/null @@ -1,20 +0,0 @@ -Rips complex is of dimension 1 - 18 simplices - 7 vertices. -Iterator on Rips complex simplices in the filtration order, with [filtration value]: - ( 0 ) -> [0] - ( 1 ) -> [0] - ( 2 ) -> [0] - ( 3 ) -> [0] - ( 4 ) -> [0] - ( 5 ) -> [0] - ( 6 ) -> [0] - ( 3 2 ) -> [5] - ( 5 4 ) -> [5.38516] - ( 2 0 ) -> [5.83095] - ( 1 0 ) -> [6.08276] - ( 3 1 ) -> [6.32456] - ( 2 1 ) -> [6.7082] - ( 6 5 ) -> [7.28011] - ( 4 2 ) -> [8.94427] - ( 3 0 ) -> [9.43398] - ( 6 4 ) -> [9.48683] - ( 6 3 ) -> [11] diff --git a/example/Rips_complex/one_skeleton_rips_from_correlation_matrix_for_doc.txt b/example/Rips_complex/one_skeleton_rips_from_correlation_matrix_for_doc.txt deleted file mode 100644 index 640d7083..00000000 --- a/example/Rips_complex/one_skeleton_rips_from_correlation_matrix_for_doc.txt +++ /dev/null @@ -1,17 +0,0 @@ -Rips complex is of dimension 1 - 15 simplices - 5 vertices. -Iterator on Rips complex simplices in the filtration order, with [filtration value]: - ( 0 ) -> [0] - ( 1 ) -> [0] - ( 2 ) -> [0] - ( 3 ) -> [0] - ( 4 ) -> [0] - ( 4 0 ) -> [0.11] - ( 2 1 ) -> [0.26] - ( 3 2 ) -> [0.28] - ( 4 3 ) -> [0.3] - ( 4 1 ) -> [0.39] - ( 2 0 ) -> [0.77] - ( 1 0 ) -> [0.94] - ( 4 2 ) -> [0.97] - ( 3 0 ) -> [0.99] - ( 3 1 ) -> [0.99] -- cgit v1.2.3