From 29499b02d1b6eafcc6419a0b6b4469152ea20a09 Mon Sep 17 00:00:00 2001
From: vrouvrea <vrouvrea@636b058d-ea47-450e-bf9e-a15bfbe3eedb>
Date: Fri, 30 Sep 2016 14:24:41 +0000
Subject: Fix compilation issues

git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/rips_complex_module@1596 636b058d-ea47-450e-bf9e-a15bfbe3eedb

Former-commit-id: 343308ef914e6a6617890f49a55eb0bb8db15ee9
---
 .../example/rips_multifield_persistence.cpp         | 21 ++++++++++++++-------
 1 file changed, 14 insertions(+), 7 deletions(-)

(limited to 'src/Persistent_cohomology/example/rips_multifield_persistence.cpp')

diff --git a/src/Persistent_cohomology/example/rips_multifield_persistence.cpp b/src/Persistent_cohomology/example/rips_multifield_persistence.cpp
index d4a07bb6..f4adc7a9 100644
--- a/src/Persistent_cohomology/example/rips_multifield_persistence.cpp
+++ b/src/Persistent_cohomology/example/rips_multifield_persistence.cpp
@@ -25,14 +25,21 @@
 #include <gudhi/Simplex_tree.h>
 #include <gudhi/Persistent_cohomology.h>
 #include <gudhi/Persistent_cohomology/Multi_field.h>
+#include <gudhi/Points_off_io.h>
 
 #include <boost/program_options.hpp>
 
 #include <string>
 #include <vector>
 
-
-typedef double Filtration_value;
+// Types definition
+using Simplex_tree = Gudhi::Simplex_tree</*Gudhi::Simplex_tree_options_fast_persistence*/>;
+using Filtration_value = Simplex_tree::Filtration_value;
+using Rips_complex = Gudhi::rips_complex::Rips_complex<Filtration_value>;
+using Multi_field = Gudhi::persistent_cohomology::Multi_field;
+using Persistent_cohomology = Gudhi::persistent_cohomology::Persistent_cohomology<Simplex_tree, Multi_field >;
+using Point = std::vector<double>;
+using Points_off_reader = Gudhi::Points_off_reader<Point>;
 
 void program_options(int argc, char * argv[]
                      , std::string & off_file_points
@@ -54,22 +61,22 @@ int main(int argc, char * argv[]) {
 
   program_options(argc, argv, off_file_points, filediag, threshold, dim_max, min_p, max_p, min_persistence);
 
-  Gudhi::rips_complex::Rips_complex<> rips_complex_from_file(off_file_points);
+  Points_off_reader off_reader(off_file_points);
+  Rips_complex rips_complex_from_file(off_reader.get_point_cloud(), threshold,
+                                      euclidean_distance<Point>);
 
   // Construct the Rips complex in a Simplex Tree
-  using Simplex_tree = Gudhi::Simplex_tree<Gudhi::Simplex_tree_options_fast_persistence>;
   Simplex_tree simplex_tree;
 
-  if (rips_complex_from_file.create_complex(simplex_tree, threshold, dim_max, euclidean_distance<std::vector<double>>)) {
+  if (rips_complex_from_file.create_complex(simplex_tree, dim_max)) {
     std::cout << "The complex contains " << simplex_tree.num_simplices() << " simplices \n";
     std::cout << "   and has dimension " << simplex_tree.dimension() << " \n";
   
     // Sort the simplices in the order of the filtration
     simplex_tree.initialize_filtration();
   
-    using Multi_field = Gudhi::persistent_cohomology::Multi_field;
     // Compute the persistence diagram of the complex
-    Gudhi::persistent_cohomology::Persistent_cohomology<Simplex_tree, Multi_field > pcoh(simplex_tree);
+    Persistent_cohomology pcoh(simplex_tree);
     // initializes the coefficient field for homology
     pcoh.init_coefficients(min_p, max_p);
   
-- 
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