From 866f6ce614e9c09c97fed12c8c0c2c9fb84fad3f Mon Sep 17 00:00:00 2001 From: Gard Spreemann Date: Sun, 8 Oct 2017 11:15:17 +0200 Subject: GUDHI 2.0.1 as released by upstream in a tarball. --- utilities/common/CMakeLists.txt | 17 ++ utilities/common/README | 19 +++ utilities/common/off_file_from_shape_generator.cpp | 189 +++++++++++++++++++++ 3 files changed, 225 insertions(+) create mode 100644 utilities/common/CMakeLists.txt create mode 100644 utilities/common/README create mode 100644 utilities/common/off_file_from_shape_generator.cpp (limited to 'utilities') diff --git a/utilities/common/CMakeLists.txt b/utilities/common/CMakeLists.txt new file mode 100644 index 00000000..b3e4b436 --- /dev/null +++ b/utilities/common/CMakeLists.txt @@ -0,0 +1,17 @@ +cmake_minimum_required(VERSION 2.6) +project(off_file_from_shape_generator) + +if (NOT CGAL_WITH_EIGEN3_VERSION VERSION_LESS 4.6.0) + add_executable ( off_file_from_shape_generator off_file_from_shape_generator.cpp ) + add_test(NAME off_file_from_shape_generator_on_sphere_1000_3_15.2 COMMAND $ + "on" "sphere" "onSphere.off" "1000" "3" "15.2") + add_test(NAME off_file_from_shape_generator_in_sphere_100_2 COMMAND $ + "in" "sphere" "inSphere.off" "100" "2") + + # on cube is not available in CGAL + add_test(NAME off_file_from_shape_generator_in_cube_10000_3_5.8 COMMAND $ + "in" "cube" "inCube.off" "10000" "3" "5.8") + + install(TARGETS off_file_from_shape_generator DESTINATION bin) + +endif(NOT CGAL_WITH_EIGEN3_VERSION VERSION_LESS 4.6.0) diff --git a/utilities/common/README b/utilities/common/README new file mode 100644 index 00000000..dc841521 --- /dev/null +++ b/utilities/common/README @@ -0,0 +1,19 @@ +======================= off_file_from_shape_generator ================================== + +Example of use : + +*** on|in sphere|cube|curve|torus|klein generator + +./off_file_from_shape_generator on sphere onSphere.off 1000 3 15.2 + + => generates a onSphere.off file with 1000 points randomized on a sphere of dimension 3 and radius 15.2 + +./off_file_from_shape_generator in sphere inSphere.off 100 2 + + => generates a inSphere.off file with 100 points randomized in a sphere of dimension 2 (circle) and radius 1.0 (default) + +./off_file_from_shape_generator in cube inCube.off 10000 3 5.8 + + => generates a inCube.off file with 10000 points randomized in a cube of dimension 3 and side 5.8 + +!! Warning: hypegenerator on cube is not available !! diff --git a/utilities/common/off_file_from_shape_generator.cpp b/utilities/common/off_file_from_shape_generator.cpp new file mode 100644 index 00000000..afcd558c --- /dev/null +++ b/utilities/common/off_file_from_shape_generator.cpp @@ -0,0 +1,189 @@ +/* This file is part of the Gudhi Library. The Gudhi library + * (Geometric Understanding in Higher Dimensions) is a generic C++ + * library for computational topology. + * + * Author(s): Vincent Rouvreau + * + * Copyright (C) 2014 INRIA Saclay (France) + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ + +#include + +#include +#include +#include + +#include +#include +#include +#include // for std::ofstream +#include + +typedef CGAL::Epick_d< CGAL::Dynamic_dimension_tag > K; +typedef K::Point_d Point; + +void usage(char * const progName) { + std::cerr << "Usage: " << progName << " in|on sphere|cube off_file_name points_number[integer > 0] " << + "dimension[integer > 1] radius[double > 0.0 | default = 1.0]" << std::endl; + exit(-1); +} + +int main(int argc, char **argv) { + // program args management + if ((argc != 6) && (argc != 7)) { + std::cerr << "Error: Number of arguments (" << argc << ") is not correct" << std::endl; + usage(argv[0]); + } + + int points_number = atoi(argv[4]); + if (points_number <= 0) { + std::cerr << "Error: " << argv[4] << " is not correct" << std::endl; + usage(argv[0]); + } + + int dimension = atoi(argv[5]); + if (dimension <= 0) { + std::cerr << "Error: " << argv[5] << " is not correct" << std::endl; + usage(argv[0]); + } + + double radius = 1.0; + if (argc == 7) { + radius = atof(argv[6]); + if (radius <= 0.0) { + std::cerr << "Error: " << argv[6] << " is not correct" << std::endl; + usage(argv[0]); + } + } + + bool in = false; + if (strcmp(argv[1], "in") == 0) { + in = true; + } else if (strcmp(argv[1], "on") != 0) { + std::cerr << "Error: " << argv[1] << " is not correct" << std::endl; + usage(argv[0]); + } + + enum class Data_shape { sphere, cube, curve, torus, klein, undefined}; + + Data_shape shape = Data_shape::undefined; + if (memcmp(argv[2], "sphere", sizeof("sphere")) == 0) { + shape = Data_shape::sphere; + } else if (memcmp(argv[2], "cube", sizeof("cube")) == 0) { + shape = Data_shape::cube; + } else if (memcmp(argv[2], "curve", sizeof("curve")) == 0) { + shape = Data_shape::curve; + } else if (memcmp(argv[2], "torus", sizeof("torus")) == 0) { + shape = Data_shape::torus; + } else if (memcmp(argv[2], "klein", sizeof("klein")) == 0) { + shape = Data_shape::klein; + } else { + std::cerr << "Error: " << argv[2] << " is not correct" << std::endl; + usage(argv[0]); + } + + std::ofstream diagram_out(argv[3]); + if (dimension == 3) { + diagram_out << "OFF" << std::endl; + diagram_out << points_number << " 0 0" << std::endl; + } else { + diagram_out << "nOFF" << std::endl; + diagram_out << dimension << " " << points_number << " 0 0" << std::endl; + } + + if (diagram_out.is_open()) { + // Generate "points_number" random points in a vector + std::vector points; + if (in) { + switch (shape) { + case Data_shape::sphere: + points = Gudhi::generate_points_in_ball_d(points_number, dimension, radius); + break; + case Data_shape::cube: + points = Gudhi::generate_points_in_ball_d(points_number, dimension, radius); + break; + case Data_shape::curve: + std::cerr << "Sorry: in curve is not available" << std::endl; + usage(argv[0]); + break; + case Data_shape::torus: + std::cerr << "Sorry: in torus is not available" << std::endl; + usage(argv[0]); + break; + case Data_shape::klein: + std::cerr << "Sorry: in klein is not available" << std::endl; + usage(argv[0]); + break; + default: + usage(argv[0]); + break; + } + } else { // means "on" + switch (shape) { + case Data_shape::sphere: + points = Gudhi::generate_points_on_sphere_d(points_number, dimension, radius); + break; + case Data_shape::cube: + std::cerr << "Sorry: on cube is not available" << std::endl; + usage(argv[0]); + break; + case Data_shape::curve: + points = Gudhi::generate_points_on_moment_curve(points_number, dimension, -radius/2., radius/2.); + break; + case Data_shape::torus: + if (dimension == 3) + points = Gudhi::generate_points_on_torus_3D(points_number, dimension, radius, radius/2.); + else + points = Gudhi::generate_points_on_torus_d(points_number, dimension, true); + break; + case Data_shape::klein: + switch (dimension) { + case 3: + points = Gudhi::generate_points_on_klein_bottle_3D(points_number, radius, radius/2., true); + break; + case 4: + points = Gudhi::generate_points_on_klein_bottle_4D(points_number, radius, radius/2., 0., true); + break; + case 5: + points = Gudhi::generate_points_on_klein_bottle_variant_5D(points_number, radius, radius/2., true); + break; + default: + std::cerr << "Sorry: on klein is only available for dimension 3, 4 and 5" << std::endl; + usage(argv[0]); + break; + } + break; + default: + usage(argv[0]); + break; + } + } + + for (auto thePoint : points) { + int i = 0; + for (; i < dimension - 1; i++) { + diagram_out << thePoint[i] << " "; + } + diagram_out << thePoint[i] << std::endl; // last point + Carriage Return + } + } else { + std::cerr << "Error: " << argv[3] << " cannot be opened" << std::endl; + usage(argv[0]); + } + + return 0; +} + -- cgit v1.2.3