/* This file is part of the Gudhi Library. The Gudhi library * (Geometric Understanding in Higher Dimensions) is a generic C++ * library for computational topology. * * Author(s): Vincent Rouvreau * * Copyright (C) 2015 INRIA Saclay (France) * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by * the Free Software Foundation, either version 3 of the License, or * (at your option) any later version. * * This program is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with this program. If not, see . */ #ifndef SRC_ALPHA_SHAPES_INCLUDE_GUDHI_ALPHA_SHAPES_DELAUNAY_TRIANGULATION_OFF_IO_H_ #define SRC_ALPHA_SHAPES_INCLUDE_GUDHI_ALPHA_SHAPES_DELAUNAY_TRIANGULATION_OFF_IO_H_ #include #include #include #include #include "gudhi/Off_reader.h" namespace Gudhi { namespace alphacomplex { /** *@brief Off reader visitor with flag that can be passed to Off_reader to read a Delaunay_triangulation_complex. */ template class Delaunay_triangulation_off_visitor_reader { private: Complex* _complex; typedef typename Complex::Point Point; public: // Pass a Complex as a parameter is required, even if not used. Otherwise, compilation is KO. Delaunay_triangulation_off_visitor_reader(Complex* _complex_ptr) : _complex(nullptr) { } void init(int dim, int num_vertices, int num_faces, int num_edges) { #ifdef DEBUG_TRACES std::cout << "Delaunay_triangulation_off_visitor_reader::init - dim=" << dim << " - num_vertices=" << num_vertices << " - num_faces=" << num_faces << " - num_edges=" << num_edges << std::endl; #endif // DEBUG_TRACES if (num_faces > 0) { std::cerr << "Delaunay_triangulation_off_visitor_reader::init faces are not taken into account from OFF " << "file for Delaunay triangulation - faces are computed." << std::endl; } if (num_edges > 0) { std::cerr << "Delaunay_triangulation_off_visitor_reader::init edges are not taken into account from OFF " << "file for Delaunay triangulation - edges are computed." << std::endl; } // Complex construction with dimension from file _complex = new Complex(dim); } void point(const std::vector& point) { #ifdef DEBUG_TRACES std::cout << "Delaunay_triangulation_off_visitor_reader::point "; for (auto coordinate : point) { std::cout << coordinate << " | "; } std::cout << std::endl; #endif // DEBUG_TRACES _complex->insert(Point(point.size(), point.begin(), point.end())); } void maximal_face(const std::vector& face) { // For Delaunay Triangulation, only points are read #ifdef DEBUG_TRACES std::cout << "Delaunay_triangulation_off_visitor_reader::face "; for (auto vertex : face) { std::cout << vertex << " | "; } std::cout << std::endl; #endif // DEBUG_TRACES } void done() { #ifdef DEBUG_TRACES std::cout << "Delaunay_triangulation_off_visitor_reader::done" << std::endl; #endif // DEBUG_TRACES } Complex* get_complex() { return _complex; } }; /** *@brief Class that allows to load a Delaunay_triangulation_complex from an off file. */ template class Delaunay_triangulation_off_reader { public: /** * name_file : file to read * read_complex : complex that will receive the file content * read_only_points : specify true if only the points must be read */ Delaunay_triangulation_off_reader(const std::string & name_file) : valid_(false) { std::ifstream stream(name_file); if (stream.is_open()) { Delaunay_triangulation_off_visitor_reader off_visitor(_complex); Off_reader off_reader(stream); valid_ = off_reader.read(off_visitor); if (valid_) { _complex = off_visitor.get_complex(); } } else { std::cerr << "Delaunay_triangulation_off_reader::Delaunay_triangulation_off_reader could not open file " << name_file << std::endl; } } /** * return true if reading did not meet problems. */ bool is_valid() const { return valid_; } Complex* get_complex() { if (valid_) return _complex; return nullptr; } private: bool valid_; Complex* _complex; }; template class Delaunay_triangulation_off_writer { public: typedef typename Complex::Point Point; /** * name_file : file where the off will be written * save_complex : complex that be outputted in the file * for now only save triangles. */ Delaunay_triangulation_off_writer(const std::string & name_file, Complex* complex_ptr) { std::ofstream stream(name_file); if (stream.is_open()) { if (complex_ptr->current_dimension() == 3) { // OFF header stream << "OFF" << std::endl; // no endl on next line - don't know why... stream << complex_ptr->number_of_vertices() << " " << complex_ptr->number_of_finite_full_cells() << " 0"; } else { // nOFF header stream << "nOFF" << std::endl; // no endl on next line - don't know why... stream << complex_ptr->current_dimension() << " " << complex_ptr->number_of_vertices() << " " << complex_ptr->number_of_finite_full_cells() << " 0"; } // bimap to retrieve vertex handles from points and vice versa std::map< Point, int > points_to_vh; // Start to insert at default handle value int vertex_handle = int(); // Points list for (auto vit = complex_ptr->vertices_begin(); vit != complex_ptr->vertices_end(); ++vit) { for (auto Coord = vit->point().cartesian_begin(); Coord != vit->point().cartesian_end(); ++Coord) { stream << *Coord << " "; } stream << std::endl; points_to_vh[vit->point()] = vertex_handle; vertex_handle++; } for (auto cit = complex_ptr->finite_full_cells_begin(); cit != complex_ptr->finite_full_cells_end(); ++cit) { std::vector vertexVector; stream << std::distance(cit->vertices_begin(), cit->vertices_end()) << " "; for (auto vit = cit->vertices_begin(); vit != cit->vertices_end(); ++vit) { stream << points_to_vh[(*vit)->point()] << " "; } stream << std::endl; } stream.close(); } else { std::cerr << "Delaunay_triangulation_off_writer::Delaunay_triangulation_off_writer could not open file " << name_file << std::endl; } } }; } // namespace alphacomplex } // namespace Gudhi #endif // SRC_ALPHA_SHAPES_INCLUDE_GUDHI_ALPHA_SHAPES_DELAUNAY_TRIANGULATION_OFF_IO_H_