#define BOOST_TEST_MODULE bottleneck test #include #include #include "../include/gudhi/Graph_matching.h" #include #include using namespace Gudhi::bipartite_graph_matching; int n1 = 81; // a natural number >0 int n2 = 180; // a natural number >0 double upper_bound = 400.5; // any real >0 BOOST_AUTO_TEST_CASE(global){ std::uniform_real_distribution unif1(0.,upper_bound); std::uniform_real_distribution unif2(upper_bound/1000.,upper_bound/100.); std::default_random_engine re; std::vector< std::pair > v1, v2; for (int i = 0; i < n1; i++) { double a = unif1(re); double b = unif1(re); double x = unif2(re); double y = unif2(re); v1.emplace_back(std::min(a,b), std::max(a,b)); v2.emplace_back(std::min(a,b)+std::min(x,y), std::max(a,b)+std::max(x,y)); if(i%5==0) v1.emplace_back(std::min(a,b),std::min(a,b)+x); if(i%3==0) v2.emplace_back(std::max(a,b),std::max(a,b)+y); } //99.5 and not 100 to avoid float errors. BOOST_CHECK(bottleneck_distance(v1, v2) <= upper_bound/99.5); } BOOST_AUTO_TEST_CASE(persistence_diagrams_graph){ // Random construction std::uniform_real_distribution unif(0.,upper_bound); std::default_random_engine re; std::vector< std::pair > v1, v2; for (int i = 0; i < n1; i++) { double a = unif(re); double b = unif(re); v1.emplace_back(std::min(a,b), std::max(a,b)); } for (int i = 0; i < n2; i++) { double a = unif(re); double b = unif(re); v2.emplace_back(std::min(a,b), std::max(a,b)); } G::initialize(v1, v2, 0.); std::unique_ptr< std::vector > d = std::move(G::sorted_distances()); // BOOST_CHECK(!G::on_the_u_diagonal(n1-1)); BOOST_CHECK(!G::on_the_u_diagonal(n1)); BOOST_CHECK(!G::on_the_u_diagonal(n2-1)); BOOST_CHECK(G::on_the_u_diagonal(n2)); BOOST_CHECK(!G::on_the_v_diagonal(n1-1)); BOOST_CHECK(G::on_the_v_diagonal(n1)); BOOST_CHECK(G::on_the_v_diagonal(n2-1)); BOOST_CHECK(G::on_the_v_diagonal(n2)); // BOOST_CHECK(G::corresponding_point_in_u(0)==n2); BOOST_CHECK(G::corresponding_point_in_u(n1)==0); BOOST_CHECK(G::corresponding_point_in_v(0)==n1); BOOST_CHECK(G::corresponding_point_in_v(n2)==0); // BOOST_CHECK(G::size()==(n1+n2)); // BOOST_CHECK((int) d->size() <= (n1+n2)*(n1+n2) - n1*n2 + 1); BOOST_CHECK(std::count(d->begin(), d->end(), G::distance(0,0))==1); BOOST_CHECK(std::count(d->begin(), d->end(), G::distance(0,n1-1))==1); BOOST_CHECK(std::count(d->begin(), d->end(), G::distance(0,n1))==1); BOOST_CHECK(std::count(d->begin(), d->end(), G::distance(0,n2-1))==1); BOOST_CHECK(std::count(d->begin(), d->end(), G::distance(0,n2))==1); BOOST_CHECK(std::count(d->begin(), d->end(), G::distance(0,(n1+n2)-1))==1); BOOST_CHECK(std::count(d->begin(), d->end(), G::distance(n1,0))==1); BOOST_CHECK(std::count(d->begin(), d->end(), G::distance(n1,n1-1))==1); BOOST_CHECK(std::count(d->begin(), d->end(), G::distance(n1,n1))==1); BOOST_CHECK(std::count(d->begin(), d->end(), G::distance(n1,n2-1))==1); BOOST_CHECK(std::count(d->begin(), d->end(), G::distance(n1,n2))==1); BOOST_CHECK(std::count(d->begin(), d->end(), G::distance(n1,(n1+n2)-1))==1); BOOST_CHECK(std::count(d->begin(), d->end(), G::distance((n1+n2)-1,0))==1); BOOST_CHECK(std::count(d->begin(), d->end(), G::distance((n1+n2)-1,n1-1))==1); BOOST_CHECK(std::count(d->begin(), d->end(), G::distance((n1+n2)-1,n1))==1); BOOST_CHECK(std::count(d->begin(), d->end(), G::distance((n1+n2)-1,n2-1))==1); BOOST_CHECK(std::count(d->begin(), d->end(), G::distance((n1+n2)-1,n2))==1); BOOST_CHECK(std::count(d->begin(), d->end(), G::distance((n1+n2)-1,(n1+n2)-1))==1); } BOOST_AUTO_TEST_CASE(planar_neighbors_finder) { Planar_neighbors_finder pnf = Planar_neighbors_finder(1.); for(int v_point_index=0; v_point_index l = *pnf.pull_all_near(n2/2); bool v = true; for(auto it = l.cbegin(); it != l.cend(); ++it) v = v && (G::distance(n2/2,*it)>1.); BOOST_CHECK(v); int v_point_index_2 = pnf.pull_near(n2/2); BOOST_CHECK(v_point_index_2 == -1); } BOOST_AUTO_TEST_CASE(neighbors_finder) { Neighbors_finder nf = Neighbors_finder(1.); for(int v_point_index=1; v_point_index<((n2+n1)*9/10); v_point_index+=2) nf.add(v_point_index); // int v_point_index_1 = nf.pull_near(n2/2); BOOST_CHECK((v_point_index_1 == -1) || (G::distance(n2/2,v_point_index_1)<=1.)); std::list l = *nf.pull_all_near(n2/2); bool v = true; for(auto it = l.cbegin(); it != l.cend(); ++it) v = v && (G::distance(n2/2,*it)>1.); BOOST_CHECK(v); int v_point_index_2 = nf.pull_near(n2/2); BOOST_CHECK(v_point_index_2 == -1); } BOOST_AUTO_TEST_CASE(layered_neighbors_finder) { Layered_neighbors_finder lnf = Layered_neighbors_finder(1.); for(int v_point_index=1; v_point_index<((n2+n1)*9/10); v_point_index+=2) lnf.add(v_point_index, v_point_index % 7); // int v_point_index_1 = lnf.pull_near(n2/2,6); BOOST_CHECK((v_point_index_1 == -1) || (G::distance(n2/2,v_point_index_1)<=1.)); int v_point_index_2 = lnf.pull_near(n2/2,6); BOOST_CHECK(v_point_index_2 == -1); v_point_index_1 = lnf.pull_near(n2/2,0); BOOST_CHECK((v_point_index_1 == -1) || (G::distance(n2/2,v_point_index_1)<=1.)); v_point_index_2 = lnf.pull_near(n2/2,0); BOOST_CHECK(v_point_index_2 == -1); } BOOST_AUTO_TEST_CASE(graph_matching) { Graph_matching m1; m1.set_r(0.); int e = 0; while (m1.multi_augment()) ++e; BOOST_CHECK(e <= 2*sqrt(2*(n1+n2))); Graph_matching m2 = m1; BOOST_CHECK(!m2.multi_augment()); m2.set_r(upper_bound); e = 0; while (m2.multi_augment()) ++e; BOOST_CHECK(e <= 2*sqrt(2*(n1+n2))); BOOST_CHECK(m2.perfect()); BOOST_CHECK(!m1.perfect()); } /* BOOST_AUTO_TEST_CASE(chrono) { std::ofstream objetfichier; objetfichier.open("results.csv", std::ios::out); for(int n =50; n<=1000; n+=100){ std::uniform_real_distribution unif1(0.,upper_bound); std::uniform_real_distribution unif2(upper_bound/1000.,upper_bound/100.); std::default_random_engine re; std::vector< std::pair > v1, v2; for (int i = 0; i < n; i++) { double a = unif1(re); double b = unif1(re); double x = unif2(re); double y = unif2(re); v1.emplace_back(std::min(a,b), std::max(a,b)); v2.emplace_back(std::min(a,b)+std::min(x,y), std::max(a,b)+std::max(x,y)); if(i%5==0) v1.emplace_back(std::min(a,b),std::min(a,b)+x); if(i%3==0) v2.emplace_back(std::max(a,b),std::max(a,b)+y); } std::chrono::steady_clock::time_point start = std::chrono::steady_clock::now(); double b = bottleneck_distance(v1,v2); std::chrono::steady_clock::time_point end = std::chrono::steady_clock::now(); typedef std::chrono::duration millisecs_t; millisecs_t duration(std::chrono::duration_cast(end-start)); objetfichier << n << ";" << duration.count() << ";" << b << std::endl; } objetfichier.close(); } */