/* This file is part of the Gudhi Library. The Gudhi library * (Geometric Understanding in Higher Dimensions) is a generic C++ * library for computational topology. * * Author(s): Pawel Dlotko * * Copyright (C) 2015 INRIA (France) * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by * the Free Software Foundation, either version 3 of the License, or * (at your option) any later version. * * This program is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with this program. If not, see . */ #ifndef common_gudhi_stat_H #define common_gudhi_stat_H namespace Gudhi { namespace Gudhi_stat { //this file contain an implementation of some common procedures used in Gudhi_stat. //double epsi = std::numeric_limits::epsilon(); double epsi = 0.000005; /** * A procedure used to compare doubles. Typically gien two doubles A and B, comparing A == B is not good idea. In this case, we use the procedure almostEqual with the epsi defined at * the top of the file. Setting up the epsi give the user a tolerance on what should be consider equal. **/ inline bool almost_equal( double a , double b ) { if ( fabs(a-b) < epsi ) return true; return false; } //landscapes /** * Extra functions needed in construction of barcodes. **/ double minus_length( std::pair a ) { return a.first-a.second; } double birth_plus_deaths( std::pair a ) { return a.first+a.second; } //landscapes /** * Given two points in R^2, the procedure compute the parameters A and B of the line y = Ax + B that crosses those two points. **/ std::pair compute_parameters_of_a_line( std::pair p1 , std::pair p2 ) { double a = (p2.second-p1.second)/( p2.first - p1.first ); double b = p1.second - a*p1.first; return std::make_pair(a,b); } //landscapes /** * This procedure given two points which lies on the opposide sides of x axis, compute x for which the line connecting those two points crosses x axis. **/ double find_zero_of_a_line_segment_between_those_two_points ( std::pair p1, std::pair p2 ) { if ( p1.first == p2.first )return p1.first; if ( p1.second*p2.second > 0 ) { std::ostringstream errMessage; errMessage <<"In function find_zero_of_a_line_segment_between_those_two_points the agguments are: (" << p1.first << "," << p1.second << ") and (" << p2.first << "," << p2.second << "). There is no zero in line between those two points. Program terminated."; std::string errMessageStr = errMessage.str(); const char* err = errMessageStr.c_str(); throw(err); } //we assume here, that x \in [ p1.first, p2.first ] and p1 and p2 are points between which we will put the line segment double a = (p2.second - p1.second)/(p2.first - p1.first); double b = p1.second - a*p1.first; //cerr << "Line crossing points : (" << p1.first << "," << p1.second << ") oraz (" << p2.first << "," << p2.second << ") : \n"; //cerr << "a : " << a << " , b : " << b << " , x : " << x << endl; return -b/a; } //landscapes /** * This method provides a comparision of points that is used in construction of persistence landscapes. The orderign is lexicographical for the first coordinate, and reverse-lexicographical for the * second coordinate. **/ bool compare_points_sorting( std::pair f, std::pair s ) { if ( f.first < s.first ) { return true; } else {//f.first >= s.first if ( f.first > s.first ) { return false; } else {//f.first == s.first if ( f.second > s.second ) { return true; } else { return false; } } } } //landscapes /** * This procedure takes two points in R^2 and a double value x. It conputes the line pasing through those two points and return the value of that linear function at x. **/ double function_value ( std::pair p1, std::pair p2 , double x ) { //we assume here, that x \in [ p1.first, p2.first ] and p1 and p2 are points between which we will put the line segment double a = (p2.second - p1.second)/(p2.first - p1.first); double b = p1.second - a*p1.first; return (a*x+b); } }//namespace Gudhi_stat }//namespace Gudhi #endif