/* This file is part of the Gudhi Library. The Gudhi library * (Geometric Understanding in Higher Dimensions) is a generic C++ * library for computational topology. * * Author(s): Mathieu Carriere * * Copyright (C) 2018 INRIA (France) * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by * the Free Software Foundation, either version 3 of the License, or * (at your option) any later version. * * This program is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with this program. If not, see . */ #include #include #include #include using PD = std::vector >; using PWG = Gudhi::Persistence_representations::Persistence_weighted_gaussian; int main(int argc, char** argv) { std::vector > persistence1; std::vector > persistence2; persistence1.push_back(std::make_pair(1, 2)); persistence1.push_back(std::make_pair(6, 8)); persistence1.push_back(std::make_pair(0, 4)); persistence1.push_back(std::make_pair(3, 8)); persistence2.push_back(std::make_pair(2, 9)); persistence2.push_back(std::make_pair(1, 6)); persistence2.push_back(std::make_pair(3, 5)); persistence2.push_back(std::make_pair(6, 10)); PWG PWG1(persistence1); PWG PWG2(persistence2); double sigma = 1; double tau = 1; int m = 1000; // Linear PWG std::cout << PWG1.compute_scalar_product (PWG2, sigma, PWG::arctan_weight, m) << std::endl; std::cout << PWG1.compute_scalar_product (PWG2, sigma, PWG::arctan_weight, -1) << std::endl; std::cout << PWG1.distance (PWG2, sigma, PWG::arctan_weight, m) << std::endl; std::cout << PWG1.distance (PWG2, sigma, PWG::arctan_weight, -1) << std::endl; // Gaussian PWG std::cout << std::exp( -PWG1.distance (PWG2, sigma, PWG::arctan_weight, m, 2) ) / (2*tau*tau) << std::endl; std::cout << std::exp( -PWG1.distance (PWG2, sigma, PWG::arctan_weight, -1, 2) ) / (2*tau*tau) << std::endl; // PSS PD pd1 = persistence1; int numpts = persistence1.size(); for(int i = 0; i < numpts; i++) pd1.emplace_back(persistence1[i].second,persistence1[i].first); PD pd2 = persistence2; numpts = persistence2.size(); for(int i = 0; i < numpts; i++) pd2.emplace_back(persistence2[i].second,persistence2[i].first); PWG pwg1(pd1); PWG pwg2(pd2); std::cout << pwg1.compute_scalar_product (pwg2, 2*std::sqrt(sigma), PWG::pss_weight, m) / (16*pi*sigma) << std::endl; std::cout << pwg1.compute_scalar_product (pwg2, 2*std::sqrt(sigma), PWG::pss_weight, -1) / (16*pi*sigma) << std::endl; std::cout << pwg1.distance (pwg2, 2*std::sqrt(sigma), PWG::pss_weight, m) / (16*pi*sigma) << std::endl; std::cout << pwg1.distance (pwg2, 2*std::sqrt(sigma), PWG::pss_weight, -1) / (16*pi*sigma) << std::endl; return 0; }