/* This file is part of the Gudhi Library. The Gudhi library * (Geometric Understanding in Higher Dimensions) is a generic C++ * library for computational topology. * * Author(s): Siargey Kachanovich * * Copyright (C) 2015 INRIA Sophia Antipolis-Méditerranée (France) * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by * the Free Software Foundation, either version 3 of the License, or * (at your option) any later version. * * This program is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with this program. If not, see . */ #ifndef CHOOSE_BY_FARTHEST_POINT_H_ #define CHOOSE_BY_FARTHEST_POINT_H_ #include #include #include // for sort #include #include namespace Gudhi { /** * \ingroup witness_complex * \brief Landmark choice strategy by iteratively adding the farthest witness from the * current landmark set as the new landmark. * \details It chooses nbL landmarks from a random access range `points` and * writes {witness}*{closest landmarks} matrix in `knn`. * * The type KNearestNeighbors can be seen as * Witness_range>, where * Witness_range and Closest_landmark_range are random access ranges * */ template < typename Kernel, typename Point_container, typename OutputIterator> void choose_by_farthest_point( Kernel& k, Point_container const &points, int nbL, OutputIterator output_it) { typename Kernel::Squared_distance_d sqdist = k.squared_distance_d_object(); int nb_points = boost::size(points); assert(nb_points >= nbL); int current_number_of_landmarks = 0; // counter for landmarks double curr_max_dist = 0; // used for defining the furhest point from L const double infty = std::numeric_limits::infinity(); // infinity (see next entry) std::vector< double > dist_to_L(nb_points, infty); // vector of current distances to L from points // Choose randomly the first landmark std::random_device rd; std::mt19937 gen(rd()); std::uniform_int_distribution<> dis(1, 6); int curr_max_w = dis(gen); for (current_number_of_landmarks = 0; current_number_of_landmarks != nbL; current_number_of_landmarks++) { // curr_max_w at this point is the next landmark *output_it++ = points[curr_max_w]; std::cout << curr_max_w << "\n"; unsigned i = 0; for (auto& p : points) { double curr_dist = sqdist(p, *(std::begin(points) + curr_max_w)); if (curr_dist < dist_to_L[i]) dist_to_L[i] = curr_dist; ++i; } // choose the next curr_max_w curr_max_dist = 0; for (i = 0; i < dist_to_L.size(); i++) if (dist_to_L[i] > curr_max_dist) { curr_max_dist = dist_to_L[i]; curr_max_w = i; } } } } // namespace Gudhi #endif // CHOOSE_BY_FARTHEST_POINT_H_