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cmake_minimum_required(VERSION 2.6)
project(GUDHI_STAT)
#persitence diagrams
add_executable ( persistence_intervals/plot_persistence_intervals persistence_intervals/plot_persistence_intervals.cpp )
target_link_libraries( persistence_intervals/plot_persistence_intervals ${Boost_SYSTEM_LIBRARY})
add_executable ( persistence_intervals/compute_birth_death_range_in_persistence_diagram persistence_intervals/compute_birth_death_range_in_persistence_diagram.cpp )
target_link_libraries( persistence_intervals/compute_birth_death_range_in_persistence_diagram ${Boost_SYSTEM_LIBRARY})
add_executable ( persistence_intervals/compute_number_of_dominant_intervals persistence_intervals/compute_number_of_dominant_intervals.cpp )
target_link_libraries( persistence_intervals/compute_number_of_dominant_intervals ${Boost_SYSTEM_LIBRARY})
add_executable ( persistence_intervals/plot_histogram_of_intervals_lengths persistence_intervals/plot_histogram_of_intervals_lengths.cpp )
target_link_libraries( persistence_intervals/plot_histogram_of_intervals_lengths ${Boost_SYSTEM_LIBRARY})
add_executable ( persistence_intervals/plot_persistence_Betti_numebrs persistence_intervals/plot_persistence_Betti_numebrs.cpp )
target_link_libraries( persistence_intervals/plot_persistence_Betti_numebrs ${Boost_SYSTEM_LIBRARY})
#when we have bottleneck and wasserstein distance computations, add suitable programs here.
#persitence landscapes
add_executable ( persistence_landscapes/average_landscapes persistence_landscapes/average_landscapes.cpp )
target_link_libraries(persistence_landscapes/average_landscapes ${Boost_SYSTEM_LIBRARY})
add_executable ( persistence_landscapes/create_landscapes persistence_landscapes/create_landscapes.cpp )
target_link_libraries(persistence_landscapes/create_landscapes ${Boost_SYSTEM_LIBRARY})
add_executable ( persistence_landscapes/plot_landscapes persistence_landscapes/plot_landscapes.cpp )
target_link_libraries(persistence_landscapes/plot_landscapes ${Boost_SYSTEM_LIBRARY})
add_executable ( persistence_landscapes/compute_distance_of_landscapes persistence_landscapes/compute_distance_of_landscapes.cpp )
target_link_libraries(persistence_landscapes/compute_distance_of_landscapes ${Boost_SYSTEM_LIBRARY})
add_executable ( persistence_landscapes/compute_scalar_product_of_landscapes persistence_landscapes/compute_scalar_product_of_landscapes.cpp )
target_link_libraries(persistence_landscapes/compute_scalar_product_of_landscapes ${Boost_SYSTEM_LIBRARY})
#persitence landscapes on a grid
add_executable ( persistence_landscapes_on_grid/average_landscapes_on_grid persistence_landscapes_on_grid/average_landscapes_on_grid.cpp )
target_link_libraries(persistence_landscapes_on_grid/average_landscapes_on_grid ${Boost_SYSTEM_LIBRARY})
add_executable ( persistence_landscapes_on_grid/create_landscapes_on_grid persistence_landscapes_on_grid/create_landscapes_on_grid.cpp )
target_link_libraries(persistence_landscapes_on_grid/create_landscapes_on_grid ${Boost_SYSTEM_LIBRARY})
add_executable ( persistence_landscapes_on_grid/plot_landscapes_on_grid persistence_landscapes_on_grid/plot_landscapes_on_grid.cpp )
target_link_libraries(persistence_landscapes_on_grid/plot_landscapes_on_grid ${Boost_SYSTEM_LIBRARY})
add_executable ( persistence_landscapes_on_grid/compute_distance_of_landscapes_on_grid persistence_landscapes_on_grid/compute_distance_of_landscapes_on_grid.cpp )
target_link_libraries(persistence_landscapes_on_grid/compute_distance_of_landscapes_on_grid ${Boost_SYSTEM_LIBRARY})
add_executable ( persistence_landscapes_on_grid/compute_scalar_product_of_landscapes_on_grid persistence_landscapes_on_grid/compute_scalar_product_of_landscapes_on_grid.cpp )
target_link_libraries(persistence_landscapes_on_grid/compute_scalar_product_of_landscapes_on_grid ${Boost_SYSTEM_LIBRARY})
#persitence heat maps
add_executable ( persistence_heat_maps/average_persistence_heat_maps persistence_heat_maps/average_persistence_heat_maps.cpp )
target_link_libraries(persistence_heat_maps/average_persistence_heat_maps ${Boost_SYSTEM_LIBRARY})
add_executable ( persistence_heat_maps/create_persistence_heat_maps persistence_heat_maps/create_persistence_heat_maps.cpp )
target_link_libraries(persistence_heat_maps/create_persistence_heat_maps ${Boost_SYSTEM_LIBRARY})
add_executable ( persistence_heat_maps/plot_persistence_heat_map persistence_heat_maps/plot_persistence_heat_map.cpp )
target_link_libraries(persistence_heat_maps/plot_persistence_heat_map ${Boost_SYSTEM_LIBRARY})
add_executable ( persistence_heat_maps/compute_distance_of_persistence_heat_maps persistence_heat_maps/compute_distance_of_persistence_heat_maps.cpp )
target_link_libraries(persistence_heat_maps/compute_distance_of_persistence_heat_maps ${Boost_SYSTEM_LIBRARY})
add_executable ( persistence_heat_maps/compute_scalar_product_of_persistence_heat_maps persistence_heat_maps/compute_scalar_product_of_persistence_heat_maps.cpp )
target_link_libraries(persistence_heat_maps/compute_scalar_product_of_persistence_heat_maps ${Boost_SYSTEM_LIBRARY})
add_executable ( persistence_heat_maps/create_pssk persistence_heat_maps/create_pssk.cpp )
target_link_libraries(persistence_heat_maps/create_pssk ${Boost_SYSTEM_LIBRARY})
add_executable ( persistence_heat_maps/create_persistence_heat_maps_weighted_by_distance_from_diagonal persistence_heat_maps/create_persistence_heat_maps_weighted_by_distance_from_diagonal.cpp )
target_link_libraries(persistence_heat_maps/create_persistence_heat_maps_weighted_by_distance_from_diagonal ${Boost_SYSTEM_LIBRARY})
add_executable ( persistence_heat_maps/create_persistence_heat_maps_weighted_by_squared_distance_from_diagonal persistence_heat_maps/create_persistence_heat_maps_weighted_by_squared_distance_from_diagonal.cpp )
target_link_libraries(persistence_heat_maps/create_persistence_heat_maps_weighted_by_squared_distance_from_diagonal ${Boost_SYSTEM_LIBRARY})
add_executable ( persistence_heat_maps/create_persistence_heat_maps_weighted_by_arctan_of_their_persistence persistence_heat_maps/create_persistence_heat_maps_weighted_by_arctan_of_their_persistence.cpp )
target_link_libraries(persistence_heat_maps/create_persistence_heat_maps_weighted_by_arctan_of_their_persistence ${Boost_SYSTEM_LIBRARY})
#persitence vectors
add_executable ( persistence_vectors/average_persistence_vectors persistence_vectors/average_persistence_vectors.cpp )
target_link_libraries(persistence_vectors/average_persistence_vectors ${Boost_SYSTEM_LIBRARY})
add_executable ( persistence_vectors/create_persistence_vectors persistence_vectors/create_persistence_vectors.cpp )
target_link_libraries(persistence_vectors/create_persistence_vectors ${Boost_SYSTEM_LIBRARY})
add_executable ( persistence_vectors/compute_distance_of_persistence_vectors persistence_vectors/compute_distance_of_persistence_vectors.cpp )
target_link_libraries(persistence_vectors/compute_distance_of_persistence_vectors ${Boost_SYSTEM_LIBRARY})
add_executable ( persistence_vectors/compute_scalar_product_of_persistence_vectors persistence_vectors/compute_scalar_product_of_persistence_vectors.cpp )
target_link_libraries(persistence_vectors/compute_scalar_product_of_persistence_vectors ${Boost_SYSTEM_LIBRARY})
add_executable ( persistence_vectors/plot_persistence_vectors persistence_vectors/plot_persistence_vectors.cpp )
target_link_libraries(persistence_vectors/plot_persistence_vectors ${Boost_SYSTEM_LIBRARY})
#some stat libraries:
add_executable ( permutation_test permutation_test.cpp )
target_link_libraries(permutation_test ${Boost_SYSTEM_LIBRARY})
#add_executable ( topological_process topological_process.cpp )
#target_link_libraries(topological_process ${Boost_SYSTEM_LIBRARY})
#add_executable ( topological_process_2 topological_process_2.cpp )
#target_link_libraries(topological_process_2 ${Boost_SYSTEM_LIBRARY})
add_executable ( Hausdorff_bootstrap Hausdorff_bootstrap.cpp )
if (TBB_FOUND)
target_link_libraries(Hausdorff_bootstrap ${TBB_LIBRARIES})
endif(TBB_FOUND)
target_link_libraries(Hausdorff_bootstrap ${Boost_SYSTEM_LIBRARY})
add_executable ( Landscape_bootstrap Landscape_bootstrap.cpp )
if (TBB_FOUND)
target_link_libraries(Landscape_bootstrap ${TBB_LIBRARIES})
endif(TBB_FOUND)
target_link_libraries(Landscape_bootstrap ${Boost_SYSTEM_LIBRARY})
add_executable ( Multiplicative_bootstrap Multiplicative_bootstrap.cpp )
if (TBB_FOUND)
target_link_libraries(Multiplicative_bootstrap ${TBB_LIBRARIES})
endif(TBB_FOUND)
target_link_libraries(Multiplicative_bootstrap ${Boost_SYSTEM_LIBRARY})
#just for Pawel's tests:
#add_executable ( NN_classification NN_classification.cpp )
#target_link_libraries(NN_classification ${Boost_SYSTEM_LIBRARY})
#
#add_executable ( compute_distance_between_vectors compute_distance_between_vectors.cpp )
#target_link_libraries(compute_distance_between_vectors ${Boost_SYSTEM_LIBRARY})
if(CGAL_FOUND)
add_executable ( sliding_window_embedding sliding_window_embedding.cpp )
target_link_libraries(sliding_window_embedding ${Boost_SYSTEM_LIBRARY} ${CGAL_LIBRARY})
if (TBB_FOUND)
target_link_libraries(sliding_window_embedding ${TBB_LIBRARIES})
endif(TBB_FOUND)
endif(CGAL_FOUND)
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