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+/* Copyright 2013 IST Austria
+ Contributed by: Ulrich Bauer, Michael Kerber, Jan Reininghaus
+
+ This file is part of PHAT.
+
+ PHAT is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Lesser General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ PHAT is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Lesser General Public License for more details.
+
+ You should have received a copy of the GNU Lesser General Public License
+ along with PHAT. If not, see <http://www.gnu.org/licenses/>. */
+
+#pragma once
+
+#include <phat/helpers/misc.h>
+
+namespace phat {
+ class vector_vector {
+
+ protected:
+ std::vector< dimension > dims;
+ std::vector< column > matrix;
+
+ thread_local_storage< column > temp_column_buffer;
+
+ public:
+ // overall number of cells in boundary_matrix
+ index _get_num_cols() const {
+ return (index)matrix.size();
+ }
+ void _set_num_cols( index nr_of_columns ) {
+ dims.resize( nr_of_columns );
+ matrix.resize( nr_of_columns );
+ }
+
+ // dimension of given index
+ dimension _get_dim( index idx ) const {
+ return dims[ idx ];
+ }
+ void _set_dim( index idx, dimension dim ) {
+ dims[ idx ] = dim;
+ }
+
+ // replaces(!) content of 'col' with boundary of given index
+ void _get_col( index idx, column& col ) const {
+ col = matrix[ idx ];
+ }
+ void _set_col( index idx, const column& col ) {
+ matrix[ idx ] = col;
+ }
+
+ // true iff boundary of given idx is empty
+ bool _is_empty( index idx ) const {
+ return matrix[ idx ].empty();
+ }
+
+ // largest row index of given column idx (new name for lowestOne())
+ index _get_max_index( index idx ) const {
+ return matrix[ idx ].empty() ? -1 : matrix[ idx ].back();
+ }
+
+ // removes the maximal index of a column
+ void _remove_max( index idx ) {
+ matrix[ idx ].pop_back();
+ }
+
+ // clears given column
+ void _clear( index idx ) {
+ matrix[ idx ].clear();
+ }
+
+ // syncronizes all data structures (essential for openmp stuff)
+ void _sync() {}
+
+ // adds column 'source' to column 'target'
+ void _add_to( index source, index target ) {
+ column& source_col = matrix[ source ];
+ column& target_col = matrix[ target ];
+ column& temp_col = temp_column_buffer();
+
+
+ size_t new_size = source_col.size() + target_col.size();
+
+ if (new_size > temp_col.size()) temp_col.resize(new_size);
+
+ std::vector<index>::iterator col_end = std::set_symmetric_difference( target_col.begin(), target_col.end(),
+ source_col.begin(), source_col.end(),
+ temp_col.begin() );
+ temp_col.erase(col_end, temp_col.end());
+
+
+ target_col.swap(temp_col);
+ }
+
+ // finalizes given column
+ void _finalize( index idx ) {
+ column& col = matrix[ idx ];
+ column(col.begin(), col.end()).swap(col);
+ }
+ };
+}